Exhaustive database searching for amino acid mutations in proteomes. (Q34267246)

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1 February 2020

title

Exhaustive database searching for amino acid mutations in proteomes (English)

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1 February 2020

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2

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1 February 2020

author name string

Doug Hyatt

series ordinal

1

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language of work or name

English

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publication date

10 May 2012

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1 February 2020

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volume

28

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1 February 2020

issue

14

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page(s)

1895-1901

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Can the false-discovery rate be misleading?

1 February 2020

cites work

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The problem with peptide presumption and low Mascot scoring

21 January 2018

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TagRecon: high-throughput mutation identification through sequence tagging

21 January 2018

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AMD biofilms: using model communities to study microbial evolution and ecological complexity in nature.

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An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

21 January 2018

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A face in the crowd: recognizing peptides through database search

21 January 2018

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Automated identification of amino acid sequence variations in proteins by HPLC/microspray tandem mass spectrometry

21 January 2018

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Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris

21 January 2018

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Shotgun protein identification and quantification by mass spectrometry.

21 January 2018

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The study of eQTL variations by RNA-seq: from SNPs to phenotypes

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RNA sequencing: advances, challenges and opportunities

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Characterization of anaerobic catabolism of p-coumarate in Rhodopseudomonas palustris by integrating transcriptomics and quantitative proteomics

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A high-throughput de novo sequencing approach for shotgun proteomics using high-resolution tandem mass spectrometry.

21 January 2018

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Quantitative tracking of isotope flows in proteomes of microbial communities

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A common open representation of mass spectrometry data and its application to proteomics research

21 January 2018

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Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: the yeast proteome

21 January 2018

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Community proteomics of a natural microbial biofilm

21 January 2018

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dbSNP: the NCBI database of genetic variation

21 January 2018

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The Paragon Algorithm, a next generation search engine that uses sequence temperature values and feature probabilities to identify peptides from tandem mass spectra.

21 January 2018

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GutenTag: high-throughput sequence tagging via an empirically derived fragmentation model

21 January 2018

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DBDigger: reorganized proteomic database identification that improves flexibility and speed

21 January 2018

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DirecTag: accurate sequence tags from peptide MS/MS through statistical scoring

21 January 2018

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InsPecT: identification of posttranslationally modified peptides from tandem mass spectra

21 January 2018

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Metaproteomics: studying functional gene expression in microbial ecosystems

21 January 2018

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A microbial world within us

21 January 2018

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10.1093/BIOINFORMATICS/BTS274

21 January 2018

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22581177%20AND%20SRC:MED&resulttype=core&format=json

journals/bioinformatics/HyattP12

1 February 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22581177%20AND%20SRC:MED&resulttype=core&format=json