Proteomics pipeline for biomarker discovery of laser capture microdissected breast cancer tissue (Q34285532)

1 August 2017

1 reference

25 November 2020

Proteomics pipeline for biomarker discovery of laser capture microdissected breast cancer tissue (English)

1 reference

negative regulation of biological process

1 August 2017

1 reference

25 November 2020

1 reference

PubMed

positive regulation of biological process

3 August 2019

1 reference

4 August 2019

1 reference

4 August 2019

1 reference

7 August 2019

1 reference

18 December 2019

1 reference

25 November 2020

1 reference

6

John A Foekens

1 reference

1 August 2017

5

John W M Martens

1 reference

1 August 2017

4

Theo M Luider

1 reference

1 August 2017

Ning Qing Liu

1

1 reference

1 August 2017

René B H Braakman

series ordinal

2

1 reference

1 August 2017

Christoph Stingl

series ordinal

3

1 reference

1 August 2017

Arzu Umar

series ordinal

7

1 reference

1 August 2017

publication date

30 May 2012

1 reference

Journal of Mammary Gland Biology and Neoplasia

1 August 2017

1 June 2012

13 references

13 March 2019

3 April 2019

19 June 2019

17 June 2019

3 August 2019

4 August 2019

7 August 2019

20 August 2019

8 September 2019

6 October 2019

11 October 2019

18 December 2019

25 November 2020

12 references

1 August 2017

19 June 2019

17 June 2019

3 August 2019

4 August 2019

7 August 2019

20 August 2019

8 September 2019

6 October 2019

11 October 2019

18 December 2019

25 November 2020

17

1 reference

1 August 2017

issue

2

1 reference

1 August 2017

page(s)

155-164

1 reference

Optimized nLC-MS workflow for laser capture microdissected breast cancer tissue

1 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428526

Laser capture microdissection applications in breast cancer proteomics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428526

Andromeda: a peptide search engine integrated into the MaxQuant environment

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428526

Reproducibility of Protein Identification of Selected Cell Types in Barrett’s Esophagus Analyzed by Combining Laser-Capture Microdissection and Mass Spectrometry

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428526

Significance of E-cadherin expression in triple-negative breast cancer

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428526

Annexin A1 regulates TGF-beta signaling and promotes metastasis formation of basal-like breast cancer cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428526

Normalization of peak intensities in bottom-up MS-based proteomics using singular value decomposition

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428526

A statistical framework for protein quantitation in bottom-up MS-based proteomics.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428526

A practical guide to the MaxQuant computational platform for SILAC-based quantitative proteomics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428526

Identification of a putative protein profile associated with tamoxifen therapy resistance in breast cancer

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428526

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428526

DAnTE: a statistical tool for quantitative analysis of -omics data.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428526

NanoLC-FT-ICR MS improves proteome coverage attainable for approximately 3000 laser-microdissected breast carcinoma cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428526

Parts per million mass accuracy on an Orbitrap mass spectrometer via lock mass injection into a C-trap

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428526

Method optimisation for peptide profiling of microdissected breast carcinoma tissue by matrix-assisted laser desorption/ionisation-time of flight and matrix-assisted laser desorption/ionisation-time of flight/time of flight-mass spectrometry

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428526

Estrogen receptor-negative breast carcinomas: a review of morphology and immunophenotypical analysis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428526

Estrogen-mediated down-regulation of E-cadherin in breast cancer cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428526

Laser capture microdissection

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428526

Quantitative proteomics reveals subset-specific viral recognition in dendritic cells.

6 July 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10911-012-9252-6

Estrogen receptor regulation of carbonic anhydrase XII through a distal enhancer in breast cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10911-012-9252-6

The role of S100 genes in breast cancer progression

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10911-012-9252-6

E-cadherin expression in estrogen receptor-positive and negative breast carcinomas of postmenopausal women.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428526

Estrogen receptor status in breast cancer is associated with remarkably distinct gene expression patterns

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428526

Mixed-Effects Statistical Model for Comparative LC−MS Proteomics Studies†

28 October 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10911-012-9252-6

Laser-capture microdissection

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22644111

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Protein quantification in label-free LC-MS experiments

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22644111

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1007/S10911-012-9252-6

1 reference

1 August 2017

1 reference

1 August 2017

1 reference