The binding site for ribosomal protein S8 in 16S rRNA and spc mRNA from Escherichia coli: minimum structural requirements and the effects of single bulged bases on S8-RNA interaction (Q34291829)

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English	The binding site for ribosomal protein S8 in 16S rRNA and spc mRNA from Escherichia coli: minimum structural requirements and the effects of single bulged bases on S8-RNA interaction	scientific article

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scholarly article

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Europe PubMed Central

PubMed publication ID

1 August 2017

The binding site for ribosomal protein S8 in 16S rRNA and spc mRNA from Escherichia coli: minimum structural requirements and the effects of single bulged bases on S8-RNA interaction (English)

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Europe PubMed Central

PubMed publication ID

1 August 2017

Escherichia coli

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based on heuristic

inferred from title

author name string

Wu H

1

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Europe PubMed Central

PubMed publication ID

1 August 2017

Jiang L

2

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Europe PubMed Central

PubMed publication ID

1 August 2017

Zimmermann RA

3

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Europe PubMed Central

PubMed publication ID

1 August 2017

language of work or name

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publication date

1 May 1994

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Europe PubMed Central

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1 August 2017

Nucleic Acids Research

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Europe PubMed Central

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1 August 2017

22

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Europe PubMed Central

PubMed publication ID

1 August 2017

9

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

1687-1695

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

Mutagenesis of ribosomal protein S8 from Escherichia coli: expression, stability, and RNA-binding properties of S8 mutants

1 reference

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Hydrogen-bonding contacts in the major groove are required for human immunodeficiency virus type-1 tat protein recognition of TAR RNA.

1 reference

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The conformation of loop E of eukaryotic 5S ribosomal RNA.

1 reference

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Collection of small subunit (16S- and 16S-like) ribosomal RNA structures

1 reference

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The interaction between the iron-responsive element binding protein and its cognate RNA is highly dependent upon both RNA sequence and structure

1 reference

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6 July 2018

Role of RNA structure in arginine recognition of TAR RNA.

1 reference

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Feedback regulation of ribosomal protein gene expression in Escherichia coli: structural homology of ribosomal RNA and ribosomal protein MRNA.

1 reference

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Escherichia coli ribosomal protein S8 feedback regulates part of spc operon

1 reference

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In vitro expression of Escherichia coli ribosomal protein genes: autogenous inhibition of translation

1 reference

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Nucleotides In 16S rRNA that are required in unmodified form for features recognized by ribosomal protein S8

1 reference

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The localization of multiple sites on 16S RNA which are cross-linked to proteins S7 and S8 in Escherichia coli 30S ribosomal subunits by treatment with 2-iminothiolane

1 reference

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Comparative anatomy of 16-S-like ribosomal RNA.

1 reference

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Extrahelical adenosine stacks into right-handed DNA: solution conformation of the d(C-G-C-A-G-A-G-C-T-C-G-C-G) duplex deduced from distance geometry analysis of nuclear Overhauser effect spectra.

1 reference

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6 July 2018

Binding of Escherichia coli ribosomal protein S8 to 16S rRNA: kinetic and thermodynamic characterization.

1 reference

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6 July 2018

Bulge-out structures in the single-stranded trimer AUA and in the duplex (CUGGUGCGG).(CCGCCCAG). A model-building and NMR study

1 reference

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Role of a bulged A residue in a specific RNA-protein interaction

1 reference

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Binding of Escherichia coli ribosomal protein S8 to 16 S rRNA. A model for the interaction and the tertiary structure of the RNA binding site.

1 reference

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How do proteins recognize specific RNA sites? New clues from autogenously regulated ribosomal proteins

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Synthesis of small RNAs using T7 RNA polymerase

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Translational regulation of the spc operon in Escherichia coli. Identification and structural analysis of the target site for S8 repressor protein

1 reference

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Interaction of Escherichia coli ribosomal protein S8 with its binding sites in ribosomal RNA and messenger RNA.

1 reference

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A detailed model of the three-dimensional structure of Escherichia coli 16 S ribosomal RNA in situ in the 30 S subunit

1 reference

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Use of T7 RNA polymerase to direct expression of cloned genes

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HIV-1 Rev regulation involves recognition of non-Watson-Crick base pairs in viral RNA.

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Human immunodeficiency virus type 1 regulator of virion expression, rev, forms nucleoprotein filaments after binding to a purine-rich "bubble" located within the rev-responsive region of viral mRNAs

1 reference

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Identification of molecular contacts between the U1 A small nuclear ribonucleoprotein and U1 RNA

1 reference

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Identification of a high-affinity RNA-binding site for the human immunodeficiency virus type 1 Rev protein

1 reference

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Arginine-mediated RNA recognition: the arginine fork.

1 reference

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Three-dimensional structures of bulge-containing DNA fragments

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1 reference

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A rapid method for purification of synthetic oligoribonucleotides

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Conformation of the TAR RNA-Arginine Complex by NMR Spectroscopy

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Maturation of the head of bacteriophage T4. I. DNA packaging events

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Conformational transitions in cytidine bulge-containing deoxytridecanucleotide duplexes: extra cytidine equilibrates between looped out (low temperature) and stacked (elevated temperature) conformations in solution

1 reference

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10.1093/NAR/22.9.1687

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Europe PubMed Central

PubMed publication ID

1 August 2017

PMC publication ID

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Europe PubMed Central

PubMed publication ID

1 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

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