Distant activation of transcription: mechanisms of enhancer action (Q34304533)

1 August 2017

title

Distant activation of transcription: mechanisms of enhancer action (English)

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1 August 2017

Olga I Kulaeva

1

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1 August 2017

Ekaterina V Nizovtseva

2

1 reference

1 August 2017

Yury S Polikanov

3

1 reference

1 August 2017

Sergei V Ulianov

4

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1 August 2017

Vasily M Studitsky

5

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1 August 2017

language of work or name

English

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publication date

8 October 2012

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Molecular and Cellular Biology

1 August 2017

published in

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1 August 2017

volume

32

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1 August 2017

issue

24

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1 August 2017

page(s)

4892-4897

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The long-range interaction landscape of gene promoters

1 August 2017

cites work

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

1 reference

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TFIIA and the transactivator Rap1 cooperate to commit TFIID for transcription initiation

6 July 2018

1 reference

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Widespread transcription at neuronal activity-regulated enhancers

6 July 2018

1 reference

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Genomic views of distant-acting enhancers

6 July 2018

1 reference

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H3.3/H2A.Z double variant-containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510544

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6 July 2018

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6 July 2018

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A facilitated tracking and transcription mechanism of long-range enhancer function

6 July 2018

1 reference

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Probability of the site juxtaposition determines the rate of protein-mediated DNA looping

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510544

Nuclear organization of the genome and the potential for gene regulation

6 July 2018

1 reference

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Higher-order structures of chromatin: the elusive 30 nm fiber

6 July 2018

1 reference

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The H3 tail domain participates in multiple interactions during folding and self-association of nucleosome arrays

6 July 2018

1 reference

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Chromatin structure can strongly facilitate enhancer action over a distance

6 July 2018

1 reference

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Inducible DNA-loop formation blocks transcriptional activation by an SV40 enhancer

6 July 2018

1 reference

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6 July 2018

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Chromatin architecture of the human genome: gene-rich domains are enriched in open chromatin fibers

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510544

Rationally designed insulator-like elements can block enhancer action in vitro

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510544

Communication over a large distance: enhancers and insulators

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510544

Circle ligation of in vitro assembled chromatin indicates a highly flexible structure

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510544

Insulators: many functions, many mechanisms.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510544

Action of prokaryotic enhancer over a distance does not require continued presence of promoter-bound sigma54 subunit

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510544

DNA supercoiling allows enhancer action over a large distance

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510544

Dynamics of site juxtaposition in supercoiled DNA.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510544

HMG I/Y regulates long-range enhancer-dependent transcription on DNA and chromatin by changes in DNA topology

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510544

Quantitative comparison of DNA looping in vitro and in vivo: chromatin increases effective DNA flexibility at short distances

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510544

Biochemistry and structural biology of transcription factor IID (TFIID)

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510544

Effect of supercoiling on the juxtaposition and relative orientation of DNA sites

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510544

Gene regulation by proteins acting nearby and at a distance

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510544

Stable DNA loops in vivo and in vitro: roles in gene regulation at a distance and in biophysical characterization of DNA.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510544

Threshold phenomena and long-distance activation of transcription by RNA polymerase II

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510544

HS2 enhancer function is blocked by a transcriptional terminator inserted between the enhancer and the promoter

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510544

Genome architecture and expression

28 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23045397

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The core histone N-terminal tail domains function independently and additively during salt-dependent oligomerization of nucleosomal arrays

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23045397

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/MCB.01127-12

1 reference

1 August 2017

1 reference

1 August 2017

1 reference