A collaborative framework for 3D alignment and classification of heterogeneous subvolumes in cryo-electron tomography. (Q34308970)

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16 February 2020

title

A collaborative framework for 3D alignment and classification of heterogeneous subvolumes in cryo-electron tomography (English)

1 reference

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16 February 2020

1 reference

2

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16 February 2020

Sriram Subramaniam

series ordinal

5

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4

Mario Borgnia

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16 February 2020

6

Guillermo Sapiro

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16 February 2020

author name string

Oleg Kuybeda

series ordinal

1

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16 February 2020

Alberto Bartesaghi

series ordinal

3

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16 February 2020

publication date

27 October 2012

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Journal of Structural Biology

16 February 2020

published in

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16 February 2020

volume

181

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16 February 2020

issue

2

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16 February 2020

page(s)

116-127

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High-throughput subtomogram alignment and classification by Fourier space constrained fast volumetric matching

16 February 2020

cites work

1 reference

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Three-dimensional structures of soluble CD4-bound states of trimeric simian immunodeficiency virus envelope glycoproteins determined by using cryo-electron tomography

6 July 2018

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Clustering and variance maps for cryo-electron tomography using wedge-masked differences

6 July 2018

1 reference

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Classification of electron sub-tomograms with neural networks and its application to template-matching.

6 July 2018

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Molecular architectures of trimeric SIV and HIV-1 envelope glycoproteins on intact viruses: strain-dependent variation in quaternary structure

6 July 2018

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Maximum likelihood based classification of electron tomographic data.

6 July 2018

1 reference

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Averaging of electron subtomograms and random conical tilt reconstructions through likelihood optimization.

6 July 2018

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Methods for identifying and averaging variable molecular conformations in tomograms of actively contracting insect flight muscle

6 July 2018

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Cryo-electron tomography of bacteria: progress, challenges and future prospects.

6 July 2018

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Membrane protein structure determination using cryo-electron tomography and 3D image averaging.

6 July 2018

1 reference

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Tomographic subvolume alignment and subvolume classification applied to myosin V and SIV envelope spikes

6 July 2018

1 reference

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Molecular architecture of native HIV-1 gp120 trimers

6 July 2018

1 reference

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Classification and 3D averaging with missing wedge correction in biological electron tomography

6 July 2018

1 reference

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Structure of Halothiobacillus neapolitanus carboxysomes by cryo-electron tomography

6 July 2018

1 reference

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3D reconstruction and processing of volumetric data in cryo-electron tomography.

6 July 2018

1 reference

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Distribution and three-dimensional structure of AIDS virus envelope spikes

6 July 2018

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New views of cells in 3D: an introduction to electron tomography

6 July 2018

1 reference

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Identification of macromolecular complexes in cryoelectron tomograms of phantom cells

6 July 2018

1 reference

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RASL: robust alignment by sparse and low-rank decomposition for linearly correlated images.

6 July 2018

1 reference

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Classification of cryo-electron sub-tomograms using constrained correlation

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3565063

Electron Tomography of Single Ice-Embedded Macromolecules: Three-Dimensional Alignment and Classification

28 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23110852

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.JSB.2012.10.010

1 reference

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16 February 2020

0 references

1 reference

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16 February 2020

PubMed publication ID

23110852

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23110852%20AND%20SRC:MED&resulttype=core&format=json