ReadqPCR and NormqPCR: R packages for the reading, quality checking and normalisation of RT-qPCR quantification cycle (Cq) data (Q34322598)

1 August 2017

title

ReadqPCR and NormqPCR: R packages for the reading, quality checking and normalisation of RT-qPCR quantification cycle (Cq) data (English)

1 reference

1 August 2017

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5

Christine Orengo

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James R Perkins

James R Perkins

1

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Matthias Kohl

Matthias Kohl

6

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author name string

John M Dawes

2

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1 August 2017

Steve B McMahon

3

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1 August 2017

David L H Bennett

4

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1 August 2017

language of work or name

English

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publication date

2 July 2012

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1 August 2017

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1 August 2017

volume

13

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1 August 2017

page(s)

296

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describes a project that uses

1 August 2017

limma

limma

2 references

22 June 2022

https://europepmc.org/article/PMC/3443438

based on heuristic

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

affy

affy package

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

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Identification of valid reference genes for gene expression studies of human stomach cancer by reverse transcription-qPCR

6 July 2018

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Selection of optimal reference genes for normalization in quantitative RT-PCR.

6 July 2018

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Evaluation of the LightCycler 1536 Instrument for high-throughput quantitative real-time PCR.

6 July 2018

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HTqPCR: high-throughput analysis and visualization of quantitative real-time PCR data in R.

6 July 2018

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A novel and universal method for microRNA RT-qPCR data normalization

6 July 2018

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Data-driven normalization strategies for high-throughput quantitative RT-PCR.

6 July 2018

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The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments

6 July 2018

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Validating nutrient-related gene expression changes from microarrays using RT(2) PCR-arrays

6 July 2018

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Inter-age variability of bona fide unvaried transcripts Normalization of quantitative PCR data in ischemic stroke.

6 July 2018

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Analyzing real-time PCR data by the comparative C(T) method

6 July 2018

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Twenty-five years of quantitative PCR for gene expression analysis.

6 July 2018

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6 July 2018

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qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data

6 July 2018

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Selection of housekeeping genes for gene expression studies in human reticulocytes using real-time PCR.

6 July 2018

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6 July 2018

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Selection of reference genes for gene expression studies in human neutrophils by real-time PCR

6 July 2018

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6 July 2018

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Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets

6 July 2018

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affy--analysis of Affymetrix GeneChip data at the probe level

6 July 2018

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Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes

6 July 2018

1 reference

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Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

6 July 2018

1 reference

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A new mathematical model for relative quantification in real-time RT-PCR

6 July 2018

1 reference

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6 July 2018

Identifiers

DOI

10.1186/1471-2164-13-296

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Dimensions Publication ID

1 August 2017

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1 August 2017

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