A statistically rigorous method for determining antigenic switching networks (Q34326030)

1 August 2017

A statistically rigorous method for determining antigenic switching networks (English)

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1 August 2017

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Robert Noble

1

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Mario Recker

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Mario Recker

series ordinal

2

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language of work or name

English

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publication date

22 June 2012

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1 August 2017

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1 August 2017

7

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1 August 2017

6

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1 August 2017

e39335

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Creative Commons Attribution 4.0 International

1 August 2017

start time

22 June 2012

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

Var Gene promoter activation in clonal Plasmodium falciparum isolates follows a hierarchy and suggests a conserved switching program that is independent of genetic background

1 reference

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Antigenic variation in Plasmodium falciparum malaria involves a highly structured switching pattern

6 July 2018

1 reference

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Hierarchical, domain type-specific acquisition of antibodies to Plasmodium falciparum erythrocyte membrane protein 1 in Tanzanian children

6 July 2018

1 reference

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Plasmodium falciparum var gene expression is modified by host immunity

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382232

Common strategies for antigenic variation by bacterial, fungal and protozoan pathogens

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382232

Mapping a common interaction site used by Plasmodium falciparum Duffy binding-like domains to bind diverse host receptors

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382232

Optimization by Simulated Annealing

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382232

Variable switching rates of malaria virulence genes are associated with chromosomal position

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382232

Parasite-intrinsic factors can explain ordered progression of trypanosome antigenic variation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382232

Pathogen escape from host immunity by a genome program for antigenic variation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382232

VSG switching in Trypanosoma brucei: antigenic variation analysed using RNAi in the absence of immune selection.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382232

Probabilistic order in antigenic variation of Trypanosoma brucei

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382232

Variable var transition rates underlie antigenic variation in malaria

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382232

Transient cross-reactive immune responses can orchestrate antigenic variation in malaria

6 July 2018

1 reference

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A new mathematical model for relative quantification in real-time RT-PCR

6 July 2018

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A model for the sequential dominance of antigenic variants in African trypanosome infections.

6 July 2018

1 reference

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Antigenic variation in trypanosomes: a computer analysis of variant order

6 July 2018

1 reference

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Ordered appearance of antigenic variants of African trypanosomes explained in a mathematical model based on a stochastic switch process and immune-selection against putative switch intermediates

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382232

Rapid switching to multiple antigenic and adhesive phenotypes in malaria

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382232

Plasmodium falciparum parasitaemia described by a new mathematical model.

6 July 2018

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The Plasmodium falciparum var gene switching rate, switching mechanism and patterns of parasite recrudescence described by mathematical modelling.

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0039335

Widespread functional specialization of Plasmodium falciparum erythrocyte membrane protein 1 family members to bind CD36 analysed across a parasite genome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0039335

Sequential, ordered acquisition of antibodies to Plasmodium falciparum erythrocyte membrane protein 1 domains

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0039335

Equation of State Calculations by Fast Computing Machines

21 January 2018

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Monte Carlo sampling methods using Markov chains and their applications

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0039335

10.1371/JOURNAL.PONE.0039335

21 January 2018

Identifiers

DOI

1 reference

1 August 2017

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1 reference

1 August 2017

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PubMed ID

22761765