Complete thermodynamic characterization of the multiple protonation equilibria of the aminoglycoside antibiotic paromomycin: a calorimetric and natural abundance 15N NMR study. (Q34354156)

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English	Complete thermodynamic characterization of the multiple protonation equilibria of the aminoglycoside antibiotic paromomycin: a calorimetric and natural abundance 15N NMR study.	scientific article

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10 January 2020

Complete thermodynamic characterization of the multiple protonation equilibria of the aminoglycoside antibiotic paromomycin: a calorimetric and natural abundance 15N NMR study (English)

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10 January 2020

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Daniel S. Pilch

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10 January 2020

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Christopher M Barbieri

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10 January 2020

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2 December 2005

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10 January 2020

Biophysical Journal

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10 January 2020

90

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10 January 2020

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10 January 2020

1338-1349

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10 January 2020

Conformational constraint as a means for understanding RNA-aminoglycoside specificity.

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6 July 2018

RNA−Ligand Interactions: Affinity and Specificity of Aminoglycoside Dimers and Acridine Conjugates to the HIV-1 Rev Response Element

1 reference

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6 July 2018

Thermodynamics of aminoglycoside-rRNA recognition.

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6 July 2018

Coupling of drug protonation to the specific binding of aminoglycosides to the A site of 16 S rRNA: elucidation of the number of drug amino groups involved and their identities

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6 July 2018

Thermodynamics of aminoglycoside-rRNA recognition: the binding of neomycin-class aminoglycosides to the A site of 16S rRNA.

1 reference

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6 July 2018

Neomycin-induced hybrid triplex formation

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6 July 2018

Aminoglycosides: perspectives on mechanisms of action and resistance and strategies to counter resistance

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6 July 2018

Structure, recognition and discrimination in RNA aptamer complexes with cofactors, amino acids, drugs and aminoglycoside antibiotics

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6 July 2018

Recognition of a cognate RNA aptamer by neomycin B: quantitative evaluation of hydrogen bonding and electrostatic interactions

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6 July 2018

Structural rearrangements of HIV-1 Tat-responsive RNA upon binding of neomycin B

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6 July 2018

Saccharide-RNA recognition in a complex formed between neomycin B and an RNA aptamer

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6 July 2018

Effect of mutations in the A site of 16 S rRNA on aminoglycoside antibiotic-ribosome interaction.

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6 July 2018

Neomycin B inhibits splicing of the td intron indirectly by interfering with translation and enhances missplicing in vivo

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6 July 2018

Inhibitors of protein-RNA complexation that target the RNA: specific recognition of human immunodeficiency virus type 1 TAR RNA by small organic molecules

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6 July 2018

Solution structure of the tobramycin-RNA aptamer complex

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6 July 2018

A new class of HIV-1 Tat antagonist acting through Tat-TAR inhibition

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6 July 2018

Paromomycin binding induces a local conformational change in the A-site of 16 S rRNA

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367285

6 July 2018

Structure, recognition and adaptive binding in RNA aptamer complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367285

6 July 2018

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1 reference

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6 July 2018

Saccharide-RNA recognition in an aminoglycoside antibiotic-RNA aptamer complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367285

6 July 2018

Structure of the A site of Escherichia coli 16S ribosomal RNA complexed with an aminoglycoside antibiotic

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367285

6 July 2018

RNA sequence determinants for aminoglycoside binding to an A-site rRNA model oligonucleotide

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367285

6 July 2018

RNA molecules that specifically and stoichiometrically bind aminoglycoside antibiotics with high affinities

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367285

6 July 2018

Antibiotic inhibition of group I ribozyme function

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367285

6 July 2018

15N nuclear magnetic resonance spectroscopy. The nebramycin aminoglycosides

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27 October 2018

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An isocratic separation of underivatized gentamicin components, 1H NMR assignment and protonation pattern

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27 October 2018

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27 October 2018

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27 October 2018

Direct observation of aminoglycoside-RNA interactions by surface plasmon resonance

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27 October 2018

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27 October 2018

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27 October 2018

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27 October 2018

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27 October 2018

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27 October 2018

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12 December 2020

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Tight binding affinities determined from thermodynamic linkage to protons by titration calorimetry

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12 December 2020

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Biologically important conformations of aminoglycoside antibiotics bound to an aminoglycoside 3'-phosphotransferase as determined by transferred nuclear Overhauser effect spectroscopy

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12 December 2020

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10.1529/BIOPHYSJ.105.075028

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10 January 2020

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10 January 2020

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10 January 2020

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