Confinement effects on the thermodynamics of protein folding: Monte Carlo simulations (Q34354299)

1 August 2017

Confinement effects on the thermodynamics of protein folding: Monte Carlo simulations (English)

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1 August 2017

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3

Juan J de Pablo

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1 August 2017

Nitin Rathore

1

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PubMed ID

16361344

1 August 2017

Thomas A Knotts

series ordinal

2

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PubMed ID

16361344

1 August 2017

language of work or name

English

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publication date

16 December 2005

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1 August 2017

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1 August 2017

90

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1 August 2017

5

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1 August 2017

1767-1773

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Unfolding of Green Fluorescent Protein mut2 in wet nanoporous silica gels.

1 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367325

Multiple folding pathways of the SH3 domain

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367325

Configurational temperature density of states simulations of proteins

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367325

How protein thermodynamics and folding mechanisms are altered by the chaperonin cage: molecular simulations

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367325

Universality classes in folding times of proteins

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367325

Simulations of beta-hairpin folding confined to spherical pores using distributed computing

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367325

Efficient, Multiple-Range Random Walk Algorithm to Calculate the Density of States

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367325

Molecular confinement influences protein structure and enhances thermal protein stability

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367325

Exploring the origins of topological frustration: design of a minimally frustrated model of fragment B of protein A.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367325

Go-ing for the prediction of protein folding mechanisms

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367325

Folding thermodynamics of a model three-helix-bundle protein.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367325

Navigating the folding routes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367325

Spin glasses and the statistical mechanics of protein folding

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367325

Confinement as a determinant of macromolecular structure and reactivity.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367325

Structure and stability of a model three-helix-bundle protein on tailored surfaces.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367325

Effects of confinement in chaperonin assisted protein folding: rate enhancement by decreasing the roughness of the folding energy landscape

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367325

Roles of native topology and chain-length scaling in protein folding: a simulation study with a Go-like model.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367325

Noninteracting local‐structure model of folding and unfolding transition in globular proteins. II. Application to two‐dimensional lattice proteins

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1367325

Protein folding and binding in confined spaces and in crowded solutions

27 October 2018

1 reference

12 December 2020

Entrapping enzyme in a functionalized nanoporous support

1 reference

12 December 2020

Stabilization of Proteins in Confined Spaces†

1 reference

12 December 2020

Improved Gō-like models demonstrate the robustness of protein folding mechanisms towards non-native interactions

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12 December 2020

Stabilization of enzymes in nanoporous materials for biosensor applications

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12 December 2020

Exploring the kinetic requirements for enhancement of protein folding rates in the GroEL cavity

1 reference

12 December 2020

10.1529/BIOPHYSJ.105.071076

Identifiers

DOI

1 reference

1 August 2017

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1 August 2017

1 reference

PubMed ID

16361344