Orientation of the tRNA anticodon in the ribosomal P-site: quantitative footprinting with U33-modified, anticodon stem and loop domains (Q34362094)

1 August 2017

title

Orientation of the tRNA anticodon in the ribosomal P-site: quantitative footprinting with U33-modified, anticodon stem and loop domains (English)

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1 August 2017

S S Ashraf

1

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1 August 2017

R Guenther

series ordinal

2

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1 August 2017

P F Agris

series ordinal

3

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1 August 2017

language of work or name

English

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publication date

1 September 1999

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1 August 2017

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1 August 2017

volume

5

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1 August 2017

issue

9

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1 August 2017

page(s)

1191-1199

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Structure and dynamics of ribosomal RNA.

1 August 2017

cites work

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369842

The path of mRNA through the bacterial ribosome: a site-directed crosslinking study using new photoreactive derivatives of guanosine and uridine

6 July 2018

1 reference

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Mutations at nucleotides G2251 and U2585 of 23 S rRNA perturb the peptidyl transferase center of the ribosome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369842

Quantitative nucleic acids footprinting: thermodynamic and kinetic approaches

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369842

Identification of 2'-hydroxyl groups required for interaction of a tRNA anticodon stem-loop region with the ribosome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369842

The ribosomal neighbourhood of the central fold of tRNA: cross-links from position 47 of tRNA located at the A, P or E site

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369842

tRNA-rRNA interactions and peptidyl transferase

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369842

The decoding region of 16S RNA; a cross-linking study of the ribosomal A, P and E sites using tRNA derivatized at position 32 in the anticodon loop

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369842

Covalent crosslinking of tRNA1Val to 16S RNA at the ribosomal P site: identification of crosslinked residues

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369842

Identification of a site on 23S ribosomal RNA located at the peptidyl transferase center

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369842

"Footprint" titrations yield valid thermodynamic isotherms

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369842

Ribosomal proteins S7 and L1 are located close to the decoding site of E. coli ribosome--affinity labeling studies with modified tRNAs carrying photoreactive probes attached adjacent to the 3'-end of the anticodon

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369842

Transfer RNA shields specific nucleotides in 16S ribosomal RNA from attack by chemical probes.

6 July 2018

1 reference

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Binding of tRNA to the ribosomal A and P sites protects two distinct sets of nucleotides in 16 S rRNA.

6 July 2018

1 reference

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Unusual resistance of peptidyl transferase to protein extraction procedures

6 July 2018

1 reference

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Hydroxyl radical cleavage of tRNA in the ribosomal P site

6 July 2018

1 reference

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The uridine in "U-turn": contributions to tRNA-ribosomal binding

6 July 2018

1 reference

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Site-selected introduction of modified purine and pyrimidine ribonucleosides into RNA by automated phosphoramidite chemistry.

27 October 2018

1 reference

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Identification of bases in 16S rRNA essential for tRNA binding at the 30S ribosomal P site

27 October 2018

1 reference

12 December 2020

The time dependence of chemical modification reveals slow steps in the folding of a group I ribozyme

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12 December 2020

Structural changes in base-paired region 28 in 16 S rRNA close to the decoding region of the 30 S ribosomal subunit are correlated to changes in tRNA binding

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12 December 2020

A novel RNA motif for neomycin recognition

1 reference

12 December 2020

RNA Folding at Millisecond Intervals by Synchrotron Hydroxyl Radical Footprinting

1 reference

12 December 2020

Binding of yeast tRNAphe anticodon arm to Escherichia coli 30 S ribosomes

1 reference

12 December 2020

10.1017/S1355838299990933

Identifiers

DOI

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1 August 2017

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1 August 2017

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