Genome diversity and divergence in Drosophila mauritiana: multiple signatures of faster X evolution (Q34366790)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25193308%20AND%20SRC:MED&resulttype=core&format=json

16 February 2020

title

Genome diversity and divergence in Drosophila mauritiana: multiple signatures of faster X evolution (English)

1 reference

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16 February 2020

main subject

Drosophila

0 references

Drosophila mauritiana

object named as

Drosophila mauritiana

1 reference

1

1 reference

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16 February 2020

Anthony J. Geneva

3

1 reference

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16 February 2020

author name string

Sarah B Kingan

2

1 reference

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16 February 2020

Jeffrey P Vedanayagam

4

1 reference

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16 February 2020

Daven C Presgraves

5

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16 February 2020

publication date

4 September 2014

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25193308%20AND%20SRC:MED&resulttype=core&format=json

Genome Biology and Evolution

16 February 2020

published in

1 reference

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16 February 2020

volume

6

1 reference

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16 February 2020

issue

9

1 reference

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16 February 2020

page(s)

2444-2458

1 reference

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Population-genetic inference from pooled-sequencing data

16 February 2020

cites work

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6 July 2018

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The faster-X effect: integrating theory and data

6 July 2018

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6 July 2018

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6 July 2018

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Genome-wide patterns of natural variation reveal strong selective sweeps and ongoing genomic conflict in Drosophila mauritiana

6 July 2018

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6 July 2018

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6 July 2018

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How can satellite DNA divergence cause reproductive isolation? Let us count the chromosomal ways

6 July 2018

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6 July 2018

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Genome sequencing reveals complex speciation in the Drosophila simulans clade

6 July 2018

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Fast gapped-read alignment with Bowtie 2

6 July 2018

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The Drosophila melanogaster Genetic Reference Panel

6 July 2018

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Extensive X-linked adaptive evolution in central chimpanzees

6 July 2018

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Sex chromosome-specific regulation in the Drosophila male germline but little evidence for chromosomal dosage compensation or meiotic inactivation

6 July 2018

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6 July 2018

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Wolbachia-induced cytoplasmic incompatibility is associated with decreased Hira expression in male Drosophila

6 July 2018

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Multiple hybridization events between Drosophila simulans and Drosophila mauritiana are supported by mtDNA introgression

6 July 2018

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6 July 2018

To pool, or not to pool?

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progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement

6 July 2018

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Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

6 July 2018

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On the utility of short intron sequences as a reference for the detection of positive and negative selection in Drosophila

6 July 2018

1 reference

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Genetic conflict and sex chromosome evolution

6 July 2018

1 reference

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Recurrent selection on the Winters sex-ratio genes in Drosophila simulans

6 July 2018

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A role for a neo-sex chromosome in stickleback speciation

6 July 2018

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The Sequence Alignment/Map format and SAMtools

6 July 2018

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Evolution of postmating reproductive isolation: the composite nature of Haldane's rule and its genetic bases

6 July 2018

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6 July 2018

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Evolution of the Drosophila nuclear pore complex results in multiple hybrid incompatibilities

6 July 2018

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6 July 2018

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A single gene causes both male sterility and segregation distortion in Drosophila hybrids

6 July 2018

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A complex genetic basis to X-linked hybrid male sterility between two species of house mice

6 July 2018

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Estimation of isolation times of the island species in the Drosophila simulans complex from multilocus DNA sequence data

6 July 2018

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Sex chromosomes and speciation in Drosophila

6 July 2018

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The impact of founder events on chromosomal variability in multiply mating species

6 July 2018

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Evidence for male-driven evolution in Drosophila.

6 July 2018

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Selective sweeps in a 2-locus model for sex-ratio meiotic drive in Drosophila simulans.

6 July 2018

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Population genomics: whole-genome analysis of polymorphism and divergence in Drosophila simulans

6 July 2018

1 reference

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A sex-ratio meiotic drive system in Drosophila simulans. II: an X-linked distorter

6 July 2018

1 reference

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X chromosome inactivation during Drosophila spermatogenesis

6 July 2018

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High-resolution genome-wide dissection of the two rules of speciation in Drosophila

6 July 2018

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Molecular analysis of core kinetochore composition and assembly in Drosophila melanogaster

6 July 2018

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6 July 2018

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6 July 2018

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The Genetic Basis of Postzygotic Reproductive Isolation Between Drosophila santomea and D. yakuba Due to Hybrid Male Sterility

6 July 2018

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Genomic scans for selective sweeps using SNP data

6 July 2018

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6 July 2018

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Soft sweeps: molecular population genetics of adaptation from standing genetic variation

6 July 2018

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A pseudohitchhiking model of X vs. autosomal diversity

6 July 2018

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DNA variability and divergence at the notch locus in Drosophila melanogaster and D. simulans: a case of accelerated synonymous site divergence

6 July 2018

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Versatile and open software for comparing large genomes

6 July 2018

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Genetic dissection of hybrid incompatibilities between Drosophila simulans and D. mauritiana. I. Differential accumulation of hybrid male sterility effects on the X and autosomes

6 July 2018

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Changing effective population size and the McDonald-Kreitman test

6 July 2018

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Hybrid sterility, Haldane's rule and speciation in Heliconius cydno and H. melpomene

6 July 2018

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Population, evolutionary and genomic consequences of interference selection

6 July 2018

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Testing the neutral theory of molecular evolution with genomic data from Drosophila.

6 July 2018

1 reference

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Adaptive protein evolution in Drosophila

6 July 2018

1 reference

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Interactions between natural selection, recombination and gene density in the genes of Drosophila.

6 July 2018

1 reference

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Sex-ratio segregation distortion associated with reproductive isolation in Drosophila

6 July 2018

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The centromere paradox: stable inheritance with rapidly evolving DNA.

6 July 2018

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Adaptive evolution of Cid, a centromere-specific histone in Drosophila

6 July 2018

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Haldane's sieve and adaptation from the standing genetic variation.

6 July 2018

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6 July 2018

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The population genetics of the origin and divergence of the Drosophila simulans complex species

6 July 2018

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Comparative genomics of mitochondrial DNA in members of the Drosophila melanogaster subgroup.

6 July 2018

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Reduced X-linked nucleotide polymorphism in Drosophila simulans

6 July 2018

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Dominance, epistasis and the genetics of postzygotic isolation

6 July 2018

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Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models

6 July 2018

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A rapidly evolving homeobox at the site of a hybrid sterility gene

6 July 2018

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A test of neutrality based on interlocus associations

6 July 2018

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Differences in crossover frequency and distribution among three sibling species of Drosophila.

6 July 2018

1 reference

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A genome-wide survey of hybrid incompatibility factors by the introgression of marked segments of Drosophila mauritiana chromosomes into Drosophila simulans.

6 July 2018

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The effect of deleterious mutations on neutral molecular variation

6 July 2018

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The dominance theory of Haldane's rule

6 July 2018

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The role of X-chromosome inactivation during spermatogenesis (Drosophila-allocycly-chromosome evolution-male sterility-dosage compensation).

6 July 2018

1 reference

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The evolutionary advantage of recombination

6 July 2018

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The hitch-hiking effect of a favourable gene

6 July 2018

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6 July 2018

12 December 2020

The genetic basis of Haldane's rule

1 reference

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Male-driven molecular evolution: a model and nucleotide sequence analysis

6 July 2018

1 reference

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Genetic analysis of X-linked sterility in hybrids between three sibling species of Drosophila.

6 July 2018

1 reference

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Statistical method for testing the neutral mutation hypothesis by DNA polymorphism

6 July 2018

1 reference

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Causes of sex ratio bias may account for unisexual sterility in hybrids: a new explanation of Haldane's rule and related phenomena

6 July 2018

1 reference

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Adaptive protein evolution at the Adh locus in Drosophila

6 July 2018

1 reference

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6 July 2018

Genetics and speciation

1 reference

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Levels of naturally occurring DNA polymorphism correlate with recombination rates in D. melanogaster

6 July 2018

1 reference

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Sequence and sequence variation within the 1.688 g/cm3 satellite DNA of Drosophila melanogaster

6 July 2018

1 reference

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Recurrent turnover of chromosome-specific satellites in Drosophila

6 July 2018

1 reference

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The rapid evolution of X-linked male-biased gene expression and the large-X effect in Drosophila yakuba, D. santomea, and their hybrids.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4202334

The 1.688 repetitive DNA of Drosophila: concerted evolution at different genomic scales and association with genes.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4202334

Inter-island divergence within Drosophila mauritiana, a species of the D. simulans complex: Past history and/or speciation in progress?

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4202334

Effective population size and the faster-X effect: an extended model

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4202334

Analysis of the genome sequences of three Drosophila melanogaster spontaneous mutation accumulation lines

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4202334

Contrasting the efficacy of selection on the X and autosomes in Drosophila.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4202334

Interspecific divergence, intrachromosomal recombination, and phylogenetic utility of Y-chromosomal genes in Drosophila

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4202334

Adaptive evolution of non-coding DNA in Drosophila

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4202334

Codon bias and noncoding GC content correlate negatively with recombination rate on the Drosophila X chromosome

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4202334

Linking phylogenetics with population genetics to reconstruct the geographic origin of a species.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4202334

Male-biased mutation, sex linkage, and the rate of adaptive evolution

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4202334

Speciation, introgressive hybridization and nonlinear rate of molecular evolution in flycatchers.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4202334

When one is not enough: introgression of mitochondrial DNA in Drosophila.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4202334

Distribution of dinucleotide microsatellites in the Drosophila melanogaster genome.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4202334

THE REPRODUCTIVE RELATIONSHIPS OF DROSOPHILA SECHELLIA WITH D. MAURITIANA, D. SIMULANS, AND D. MELANOGASTER FROM THE AFROTROPICAL REGION.

27 October 2018

1 reference

PubMed

12 December 2020

HALDANE'S RULE: A DEFENSE OF THE MEIOTIC DRIVE THEORY.

1 reference

PubMed

12 December 2020

The effect of linkage on limits to artificial selection

1 reference

PubMed

12 December 2020

Identifiers

DOI

10.1093/GBE/EVU198

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25193308%20AND%20SRC:MED&resulttype=core&format=json

16 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25193308%20AND%20SRC:MED&resulttype=core&format=json

16 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25193308%20AND%20SRC:MED&resulttype=core&format=json