IMG 4 version of the integrated microbial genomes comparative analysis system (Q34380660)

1 August 2017

IMG 4 version of the integrated microbial genomes comparative analysis system (English)

1 reference

1 August 2017

0 references

16

1 reference

1 August 2017

17

1 reference

1 August 2017

9

Tanja Woyke

0 references

Neha Varghese

13

Neha Varghese

0 references

Konstantinos Billis

Konstantinos Billis

12

0 references

Amrita Pati

15

Amrita Pati

1 reference

1 August 2017

10

Marcel Huntemann

1 reference

1 August 2017

11

Iain Anderson

1 reference

1 August 2017

Konstantinos Mavromatis

14

Konstantinos Mavromatis

1 reference

1 August 2017

3

Krishna Palaniappan

1 reference

1 August 2017

1

Victor M Markowitz

1 reference

1 August 2017

5

Ernest Szeto

1 reference

1 August 2017

6

Manoj Pillay

1 reference

1 August 2017

8

Jinghua Huang

1 reference

1 August 2017

I-Min A Chen

2

1 reference

1 August 2017

Ken Chu

4

1 reference

1 August 2017

Anna Ratner

7

1 reference

1 August 2017

language of work or name

English

0 references

publication date

27 October 2013

1 reference

1 August 2017

Nucleic Acids Research

1 reference

1 August 2017

42

1 reference

1 August 2017

D560-7

1 reference

1 August 2017

Database issue

1 reference

Creative Commons Attribution-NonCommercial 3.0 Unported

1 August 2017

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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1 reference

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6 July 2018

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Rfam 11.0: 10 years of RNA families

6 July 2018

1 reference

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Fast gapped-read alignment with Bowtie 2

6 July 2018

1 reference

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IMG: the Integrated Microbial Genomes database and comparative analysis system

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965111

The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965111

The Pfam protein families database

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965111

NCBI Reference Sequences (RefSeq): current status, new features and genome annotation policy

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965111

The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965111

KEGG for integration and interpretation of large-scale molecular data sets

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965111

Search and clustering orders of magnitude faster than BLAST

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965111

Prodigal: prokaryotic gene recognition and translation initiation site identification

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965111

A new generation of homology search tools based on probabilistic inference

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965111

Natural products version 2.0: connecting genes to molecules.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965111

Gene context analysis in the Integrated Microbial Genomes (IMG) data management system

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965111

IMG ER: a system for microbial genome annotation expert review and curation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965111

Infernal 1.0: inference of RNA alignments

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965111

The Transporter Classification Database: recent advances

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965111

CRISPR Recognition Tool (CRT): a tool for automatic detection of clustered regularly interspaced palindromic repeats

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965111

RNAmmer: consistent and rapid annotation of ribosomal RNA genes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965111

Locating proteins in the cell using TargetP, SignalP and related tools

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965111

PILER-CR: fast and accurate identification of CRISPR repeats

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965111

TIGRFAMs and Genome Properties: tools for the assignment of molecular function and biological process in prokaryotic genomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965111

Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome"

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965111

The COG database: an updated version includes eukaryotes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965111

Evaluation of methods for the prediction of membrane spanning regions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965111

Protein interaction maps for complete genomes based on gene fusion events

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965111

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

6 July 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965111

6 July 2018

https://api.crossref.org/works/10.1093%2FNAR%2FGKT963

21 January 2018

Identifiers

DOI

10.1093/NAR/GKT963

1 reference

journals/nar/MarkowitzCPCSPRHWHABVMPIK14

1 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

1 August 2017

1 reference