Expanding protein universe and its origin from the biological Big Bang (Q34392268)

1 August 2017

Expanding protein universe and its origin from the biological Big Bang (English)

1 reference

1 August 2017

1 reference

Nikolay V Dokholyan

1

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Eugene I. Shakhnovich

series ordinal

3

object named as

Eugene I Shakhnovich

1 reference

1 August 2017

2

Boris Shakhnovich

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PubMed ID

12384571

1 August 2017

language of work or name

English

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publication date

16 October 2002

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Proceedings of the National Academy of Sciences of the United States of America

1 August 2017

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1 August 2017

99

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1 August 2017

22

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1 August 2017

14132-14136

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Automated assignment of SCOP and CATH protein structure classifications from FSSP scores.

1 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137849

The CATH protein family database: a resource for structural and functional annotation of genomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137849

Identification of homology in protein structure classification.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137849

Plasticity of fitness and diversification process during an experimental molecular evolution

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137849

Domain combinations in archaeal, eubacterial and eukaryotic proteomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137849

Lethality and centrality in protein networks

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137849

Evolution of function in protein superfamilies, from a structural perspective.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137849

Structure of Growing Networks with Preferential Linking

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137849

Emergence of Scaling in Random Networks

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137849

Universally conserved positions in protein folds: reading evolutionary signals about stability, folding kinetics and function

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137849

Advances in structural genomics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137849

From protein structure to function.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137849

Evolution of an enzyme active site: the structure of a new crystal form of muconate lactonizing enzyme compared with mandelate racemase and enolase

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137849

Protein structures sustain evolutionary drift

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137849

An evolutionary treasure: unification of a broad set of amidohydrolases related to urease

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137849

Foldons, protein structural modules, and exons

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137849

Mapping the protein universe

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137849

Why are some proteins structures so common?

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137849

Why are the same protein folds used to perform different functions?

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137849

Protein structure comparison by alignment of distance matrices

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137849

SCOP: a structural classification of proteins database for the investigation of sequences and structures

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137849

Why do globular proteins fit the limited set of folding patterns?

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137849

The classification and origins of protein folding patterns

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137849

Protein design: a perspective from simple tractable models.

6 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.202497999

Statistical mechanics of complex networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.202497999

Connectivity of growing random networks.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.202497999

Emergence of Preferred Structures in a Simple Model of Protein Folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.202497999

Understanding hierarchical protein evolution from first principles 1 1Edited by J. Thornton

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.202497999

Diffusion in disordered media

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.202497999

Why do protein architectures have Boltzmann-like statistics?

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.202497999

The distribution of structures in evolving protein populations

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.202497999

Protein family and fold occurrence in genomes: power-law behaviour and evolutionary model

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.202497999

Predictions of gene family distributions in microbial genomes: evolution by gene duplication and modification

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.202497999

21 January 2018

Identifiers

DOI

10.1073/PNAS.202497999

1 reference

1 August 2017

0 references

1 reference

1 August 2017

1 reference

PubMed ID

12384571