RazerS 3: faster, fully sensitive read mapping (Q34393870)

1 August 2017

RazerS 3: faster, fully sensitive read mapping (English)

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1 August 2017

2

Manuel Holtgrewe

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1 August 2017

David Weese

1

1 reference

PubMed ID

22923295

1 August 2017

Knut Reinert

series ordinal

3

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PubMed ID

22923295

1 August 2017

language of work or name

English

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publication date

24 August 2012

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1 August 2017

8

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based on heuristic

inferred from page(s)

published in

Bioinformatics

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1 August 2017

28

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1 August 2017

20

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1 August 2017

2592-2599

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Hobbes: optimized gram-based methods for efficient read alignment

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1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS505

Personalized copy number and segmental duplication maps using next-generation sequencing.

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1 reference

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SHRiMP2: sensitive yet practical SHort Read Mapping

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS505

Substantial biases in ultra-short read data sets from high-throughput DNA sequencing

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1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS505

SeqAn an efficient, generic C++ library for sequence analysis

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1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS505

An improved algorithm for matching biological sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS505

Fast mapping of short sequences with mismatches, insertions and deletions using index structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS505

A novel and well-defined benchmarking method for second generation read mapping

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS505

Fast gapped-read alignment with Bowtie 2

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS505

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS505

Fast and accurate short read alignment with Burrows-Wheeler transform

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS505

A survey of sequence alignment algorithms for next-generation sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS505

SOAP2: an improved ultrafast tool for short read alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS505

A fast bit-vector algorithm for approximate string matching based on dynamic programming

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS505

A general method applicable to the search for similarities in the amino acid sequence of two proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS505

Efficient q-gram filters for finding all epsilon-matches over a given length

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS505

Finding approximate patterns in strings

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS505

RazerS--fast read mapping with sensitivity control

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS505

10.1093/BIOINFORMATICS/BTS505

21 January 2018

Identifiers

DOI

1 reference

journals/bioinformatics/WeeseHR12

1 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

PubMed ID

22923295