Platyzoan paraphyly based on phylogenomic data supports a noncoelomate ancestry of spiralia (Q34416122)

2 August 2017

Platyzoan paraphyly based on phylogenomic data supports a noncoelomate ancestry of spiralia (English)

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2 August 2017

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2 August 2017

Malte Petersen

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Torsten H. Struck

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Torsten H Struck

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2 August 2017

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Anne Weigert

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2 August 2017

Alexandra R Wey-Fabrizius

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2 August 2017

Anja Golombek

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2 August 2017

Sabrina Klebow

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Nataliia Iakovenko

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Patrick Kück

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Holger Herlyn

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Thomas Hankeln

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18 April 2014

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Molecular Biology and Evolution

2 August 2017

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31

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7

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2 August 2017

1833-1849

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Epidermal ultrastructure of Seison nebaliae and Seison annulatus , and a comparison of epidermal structures within the Gnathifera

2 August 2017

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

PCA and clustering reveal alternate mtDNA phylogeny of N and M clades

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Do orthologous gene phylogenies really support tree-thinking?

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

A review of long-branch attraction

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

A comprehensive analysis of bilaterian mitochondrial genomes and phylogeny.

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

21 January 2018

GeneWise and Genomewise

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

The role of character loss in phylogenetic reconstruction as exemplified for the Annelida

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

A revised six-kingdom system of life

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Interplay between a Wnt-dependent organiser and the Notch segmentation clock regulates posterior development in Periplaneta americana

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Parallel evolution of segmentation by co-option of ancestral gene regulatory networks

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Segmentation, metamerism and the Cambrian explosion

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Gene regulatory networks and the evolution of animal body plans

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

The molecular ancestry of segmentation mechanisms

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Broad phylogenomic sampling improves resolution of the animal tree of life

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

HaMStR: profile hidden markov model based search for orthologs in ESTs

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Higher-level metazoan relationships: recent progress and remaining questions

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Assembling the lophotrochozoan (=spiralian) tree of life

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

The New View of Animal Phylogeny

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Spiralian phylogenomics supports the resurrection of Bryozoa comprising Ectoprocta and Entoprocta

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Phylogenetic relationships within the lophophorate lineages (Ectoprocta, Brachiopoda and Phoronida).

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Assessing the root of bilaterian animals with scalable phylogenomic methods

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Opsins in onychophora (velvet worms) suggest a single origin and subsequent diversification of visual pigments in arthropods

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Comparative neuroanatomy suggests repeated reduction of neuroarchitectural complexity in Annelida

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Is the Felsenstein zone a fly trap?

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

When molecules and morphology clash: reconciling conflicting phylogenies of the Metazoa by considering secondary character loss

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

MAFFT version 5: improvement in accuracy of multiple sequence alignment

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Improved base calling for the Illumina Genome Analyzer using machine learning strategies

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Long branch effects distort maximum likelihood phylogenies in simulations despite selection of the correct model

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

FASconCAT: Convenient handling of data matrices

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Parametric and non-parametric masking of randomness in sequence alignments can be improved and leads to better resolved trees

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

BaCoCa--a heuristic software tool for the parallel assessment of sequence biases in hundreds of gene and taxon partitions

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Suppression of long-branch attraction artefacts in the animal phylogeny using a site-heterogeneous model

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

A Bayesian mixture model for across-site heterogeneities in the amino-acid replacement process

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

PhyloBayes MPI: phylogenetic reconstruction with infinite mixtures of profiles in a parallel environment

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

The effect of ambiguous data on phylogenetic estimates obtained by maximum likelihood and Bayesian inference

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Chaetognath phylogenomics: a protostome with deuterostome-like development

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Broad taxon and gene sampling indicate that chaetognaths are protostomes.

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

A phylogenomic approach to resolve the arthropod tree of life

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Illumina sequencing library preparation for highly multiplexed target capture and sequencing

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

New phylogenomic data support the monophyly of Lophophorata and an Ectoproct-Phoronid clade and indicate that Polyzoa and Kryptrochozoa are caused by systematic bias

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Evolution of centralized nervous systems: two schools of evolutionary thought

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Deep metazoan phylogeny: when different genes tell different stories.

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Bilaterian phylogeny: a broad sampling of 13 nuclear genes provides a new Lophotrochozoa phylogeny and supports a paraphyletic basal acoelomorpha

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Lophotrochozoa internal phylogeny: new insights from an up-to-date analysis of nuclear ribosomal genes

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Resolving difficult phylogenetic questions: why more sequences are not enough

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Phylogenomics revives traditional views on deep animal relationships

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Comparative description of ten transcriptomes of newly sequenced invertebrates and efficiency estimation of genomic sampling in non-model taxa

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Toward resolving the eukaryotic tree: the phylogenetic positions of jakobids and cercozoans.

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Impact of missing data on phylogenies inferred from empirical phylogenomic data sets

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Inferring ancient divergences requires genes with strong phylogenetic signals.

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Misleading results of likelihood-based phylogenetic analyses in the presence of missing data

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Radical instability and spurious branch support by likelihood when applied to matrices with non-random distributions of missing data

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Spurious 99% bootstrap and jackknife support for unsupported clades.

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Automated generation of heuristics for biological sequence comparison

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Phyutility: a phyloinformatics tool for trees, alignments and molecular data

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

The impact of paralogy on phylogenomic studies - a case study on annelid relationships

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Phylogenetic position of Nemertea derived from phylogenomic data

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Phylogenomic analyses unravel annelid evolution

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Visualizing and assessing phylogenetic congruence of core gene sets: a case study of the gamma-proteobacteria

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Profiling by image registration reveals common origin of annelid mushroom bodies and vertebrate pallium

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Transcriptome data reveal Syndermatan relationships and suggest the evolution of endoparasitism in Acanthocephala via an epizoic stage

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Support for the monophyletic origin of Gnathifera from phylogenomics.

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

Detecting the symplesiomorphy trap: a multigene phylogenetic analysis of terebelliform annelids

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU143

21 January 2018

Identifiers

DOI

10.1093/MOLBEV/MSU143

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2 August 2017

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