The genome-scale metabolic network analysis of Zymomonas mobilis ZM4 explains physiological features and suggests ethanol and succinic acid production strategies (Q34419144)

From Wikidata

Jump to navigation Jump to search

scientific article

Language	Label	Description	Also known as
English	The genome-scale metabolic network analysis of Zymomonas mobilis ZM4 explains physiological features and suggests ethanol and succinic acid production strategies	scientific article

Statements

scholarly article

1 reference

Europe PubMed Central

2 August 2017

The genome-scale metabolic network analysis of Zymomonas mobilis ZM4 explains physiological features and suggests ethanol and succinic acid production strategies (English)

1 reference

Europe PubMed Central

2 August 2017

Zymomonas mobilis

object named as

Zymomonas mobilis

1 reference

based on heuristic

inferred from title

object named as

Sang Yup Lee

5

0 references

author name string

Kyung Yun Lee

1

1 reference

Europe PubMed Central

2 August 2017

Jong Myoung Park

2

1 reference

Europe PubMed Central

2 August 2017

Tae Yong Kim

3

1 reference

Europe PubMed Central

2 August 2017

Hongseok Yun

4

1 reference

Europe PubMed Central

2 August 2017

publication date

24 November 2010

1 reference

Europe PubMed Central

2 August 2017

Microbial Cell Factories

1 reference

Europe PubMed Central

2 August 2017

9

1 reference

Europe PubMed Central

2 August 2017

94

1 reference

Europe PubMed Central

2 August 2017

https://scigraph.springernature.com/pub.10.1186/1475-2859-9-94

0 references

Prediction of metabolic fluxes by incorporating genomic context and flux-converging pattern analyses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

Metabolic flux control at the pyruvate node in an anaerobic Escherichia coli strain with an active pyruvate dehydrogenase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

AraGEM, a genome-scale reconstruction of the primary metabolic network in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

Flux-sum analysis: a metabolite-centric approach for understanding the metabolic network

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

Metabolic engineering of Escherichia coli for the production of polylactic acid and its copolymers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

The comprehensive microbial resource

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

Connecting extracellular metabolomic measurements to intracellular flux states in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

Towards systems metabolic engineering of microorganisms for amino acid production

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

Application of systems biology for bioprocess development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

Analysis of Aspergillus nidulans metabolism at the genome-scale

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

Systems metabolic engineering of Escherichia coli for L-threonine production

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

Metabolic Engineering of a Pentose Metabolism Pathway in Ethanologenic Zymomonas mobilis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

Metabolite essentiality elucidates robustness of Escherichia coli metabolism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and thermodynamic information

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

Metabolic engineering of Escherichia coli for the production of L-valine based on transcriptome analysis and in silico gene knockout simulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

Quantifying the metabolic capabilities of engineered Zymomonas mobilis using linear programming analysis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

Global reconstruction of the human metabolic network based on genomic and bibliomic data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

TransportDB: a comprehensive database resource for cytoplasmic membrane transport systems and outer membrane channels

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

Genome-based metabolic engineering of Mannheimia succiniciproducens for succinic acid production

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

From genomics to chemical genomics: new developments in KEGG

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

TCDB: the Transporter Classification Database for membrane transport protein analyses and information

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

Systems biotechnology for strain improvement

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

MFAML: a standard data structure for representing and exchanging metabolic flux models

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

The genome sequence of the ethanologenic bacterium Zymomonas mobilis ZM4

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

The genome sequence of the capnophilic rumen bacterium Mannheimia succiniciproducens

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

Reconstruction and validation of Saccharomyces cerevisiae iND750, a fully compartmentalized genome-scale metabolic model

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

Reconstruction of the central carbon metabolism of Aspergillus niger

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

ExPASy: The proteomics server for in-depth protein knowledge and analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

Genome-scale metabolic model of Helicobacter pylori 26695.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

BRENDA: a resource for enzyme data and metabolic information

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

Improvement of microbial strains and fermentation processes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

Kinetic and nuclear magnetic resonance studies of xylose metabolism by recombinant Zymomonas mobilis ZM4(pZB5).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

Toward metabolic phenomics: analysis of genomic data using flux balances

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

Development of an arabinose-fermenting Zymomonas mobilis strain by metabolic pathway engineering

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

Cellular and metabolic engineering. An overview

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

A novel aerobic respiratory chain-linked NADH oxidase system in Zymomonas mobilis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

Lipid composition of Zymomonas mobilis: effects of ethanol and glucose

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

Genetic engineering of ethanol production in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

Efficient ethanol production from glucose, lactose, and xylose by recombinant Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

Content and composition of hopanoids in Zymomonas mobilis under various growth conditions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

The biology of Zymomonas

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

6 July 2018

In silico aided metabolic engineering of Saccharomyces cerevisiae for improved bioethanol production

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

27 October 2018

Identifying gene targets for the metabolic engineering of lycopene biosynthesis in Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

27 October 2018

MetaFluxNet, a program package for metabolic pathway construction and analysis, and its use in large-scale metabolic flux analysis of Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

27 October 2018

Synthesis of the aminocyclopentitol moieties of the hopanoids of Zymomonas mobilis and 'Anacystis montana'.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

27 October 2018

Composite hopanoid biosynthesis in Zymomonas mobilis: N-acetyl-D-glucosamine as precursor for the cyclopentane ring linked to bacteriohopanetetrol

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

27 October 2018

Cloning of conserved genes from Zymomonas mobilis and Bradyrhizobium japonicum that function in the biosynthesis of hopanoid lipids.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

27 October 2018

Improved genome annotation for Zymomonas mobilis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3004842

9 December 2018

Zymomonas mobilis: A bacterium for ethanol production

1 reference

https://pubmed.ncbi.nlm.nih.gov/21092328

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analysis of intact hopanoids and other lipids from the bacterium Zymomonas mobilis by high-performance liquid chromatography

1 reference

https://pubmed.ncbi.nlm.nih.gov/21092328

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Simultaneous ethanol and bacterial ice nuclei production from sugar beet molasses by a Zymomonas mobilis CP4 mutant expressing the inaZ gene of Pseudomonas syringae in continuous culture

1 reference

https://pubmed.ncbi.nlm.nih.gov/21092328

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

BioSilico: an integrated metabolic database system

1 reference

https://pubmed.ncbi.nlm.nih.gov/21092328

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The effect of ethanol and oxygen on the growth of Zymomonas mobilis and the levels of hopanoids and other membrane lipids

1 reference

https://pubmed.ncbi.nlm.nih.gov/21092328

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Network-based prediction of human tissue-specific metabolism

1 reference

https://pubmed.ncbi.nlm.nih.gov/21092328

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome-scale metabolic network analysis and drug targeting of multi-drug resistant pathogen Acinetobacter baumannii AYE

1 reference

https://pubmed.ncbi.nlm.nih.gov/21092328

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Metabolic state of Zymomonas mobilis in glucose-, fructose-, and xylose-fed continuous cultures as analysed by 13C- and 31P-NMR spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/21092328

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome-scale modeling and in silico analysis of mouse cell metabolic network

1 reference

https://pubmed.ncbi.nlm.nih.gov/21092328

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1475-2859-9-94

1 reference

Europe PubMed Central

2 August 2017

Dimensions Publication ID

0 references

1 reference

Europe PubMed Central

2 August 2017

1 reference

Europe PubMed Central

2 August 2017

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q34419144&oldid=2139425459"