A comparative analysis of the intestinal metagenomes present in guinea pigs (Cavia porcellus) and humans (Homo sapiens). (Q34424080)

2 August 2017

A comparative analysis of the intestinal metagenomes present in guinea pigs (Cavia porcellus) and humans (Homo sapiens). (English)

1 reference

2 August 2017

0 references

0 references

5

Si Brask Sonne

0 references

Falk Hildebrand

Falk Hildebrand

1

0 references

Lise Madsen

Lise Madsen

8

0 references

Jeroen Raes

Jeroen Raes

11

0 references

Tine Rask Licht

Tine Rask Licht

13

0 references

Jun Wang

10

1 reference

2 August 2017

12

Karsten Kristiansen

1 reference

2 August 2017

Tine Ebersbach

2

1 reference

2 August 2017

Henrik Bjørn Nielsen

3

1 reference

2 August 2017

Xiaoping Li

4

1 reference

2 August 2017

Si Brask Sonne

5

1 reference

2 August 2017

Marcelo Bertalan

6

1 reference

2 August 2017

Peter Dimitrov

7

1 reference

2 August 2017

Junjie Qin

9

1 reference

2 August 2017

language of work or name

English

0 references

publication date

28 September 2012

1 reference

2 August 2017

1 reference

2 August 2017

13

1 reference

2 August 2017

514

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-13-514

2 August 2017

0 references

cites work

Interactions between the microbiota and the immune system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

Gene-centric metagenomics analysis of feline intestinal microbiome using 454 junior pyrosequencing

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

Ecology and physiology of the intestinal tract

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

Diet drives convergence in gut microbiome functions across mammalian phylogeny and within humans

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

Bacterial extracellular polysaccharides.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

Enterotypes of the human gut microbiome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

Mucin dynamics and enteric pathogens.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

The genome of Akkermansia muciniphila, a dedicated intestinal mucin degrader, and its use in exploring intestinal metagenomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

Virulence-associated and antibiotic resistance genes of microbial populations in cattle feces analyzed using a metagenomic approach

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

Phylogenetic and gene-centric metagenomics of the canine intestinal microbiome reveals similarities with humans and mice

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

Muc2 protects against lethal infectious colitis by disassociating pathogenic and commensal bacteria from the colonic mucosa

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

A human gut microbial gene catalogue established by metagenomic sequencing

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

Mucin gene deficiency in mice impairs host resistance to an enteric parasitic infection.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

De novo assembly of human genomes with massively parallel short read sequencing

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

eggNOG v2.0: extending the evolutionary genealogy of genes with enhanced non-supervised orthologous groups, species and functional annotations

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

Listeria as an enteroinvasive gastrointestinal pathogen

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

The diploid genome sequence of an Asian individual

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

Interactomics in the human intestine: Lactobacilli and Bifidobacteria make a difference

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

Evolution of mammals and their gut microbes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

Human listeriosis and animal models

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

Oxygen restriction increases the infective potential of Listeria monocytogenes in vitro in Caco-2 cells and in vivo in guinea pigs

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

Akkermansia muciniphila gen. nov., sp. nov., a human intestinal mucin-degrading bacterium.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

The microbiology of butyrate formation in the human colon

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

KEGG: kyoto encyclopedia of genes and genomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

A single amino acid in E-cadherin responsible for host specificity towards the human pathogen Listeria monocytogenes.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

Radial and axial variations of bacteria within the cecum and proximal colon of guinea pigs revealed by PCR-DGGE.

6 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2164-13-514

Establishment of specific pathogen-free guinea-pig colonies using limited-flora guinea-pigs associated with conventional guinea-pig flora, and monitoring of their cecal flora

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2164-13-514

Phymm and PhymmBL: metagenomic phylogenetic classification with interpolated Markov models

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2164-13-514

Certain dietary carbohydrates promote Listeria infection in a guinea pig model, while others prevent it

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

Comparison of three Listeria monocytogenes strains in a guinea-pig model simulating food-borne exposure

27 October 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3472315

27 October 2018

https://api.crossref.org/works/10.1186%2F1471-2164-13-514

21 January 2018

Identifiers

DOI

10.1186/1471-2164-13-514

1 reference

Dimensions Publication ID

2 August 2017

0 references

1 reference

2 August 2017

1 reference