The adult cystic fibrosis airway microbiota is stable over time and infection type, and highly resilient to antibiotic treatment of exacerbations (Q34437958)

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English	The adult cystic fibrosis airway microbiota is stable over time and infection type, and highly resilient to antibiotic treatment of exacerbations	scientific article

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scholarly article

1 reference

Europe PubMed Central

2 August 2017

The adult cystic fibrosis airway microbiota is stable over time and infection type, and highly resilient to antibiotic treatment of exacerbations (English)

1 reference

Europe PubMed Central

2 August 2017

cystic fibrosis

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Michael M Tunney

object named as

Michael M Tunney

6

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object named as

J Stuart Elborn

4

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Deirdre F Gilpin

object named as

Deirdre F Gilpin

3

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author name string

Anthony A Fodor

1

1 reference

Europe PubMed Central

2 August 2017

Erich R Klem

2

1 reference

Europe PubMed Central

2 August 2017

Richard C Boucher

5

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Europe PubMed Central

2 August 2017

Matthew C Wolfgang

7

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Europe PubMed Central

2 August 2017

language of work or name

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publication date

26 September 2012

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Europe PubMed Central

2 August 2017

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Europe PubMed Central

2 August 2017

7

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Europe PubMed Central

2 August 2017

e45001

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Europe PubMed Central

2 August 2017

9

1 reference

Europe PubMed Central

2 August 2017

copyright license

Creative Commons Attribution 4.0 International

26 September 2012

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April 2022 Public Data File from Crossref

copyright status

0 references

Decade-long bacterial community dynamics in cystic fibrosis airways

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

6 July 2018

Lung function decline from adolescence to young adulthood in cystic fibrosis

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

6 July 2018

Identification and Quantification of Abundant Species from Pyrosequences of 16S rRNA by Consensus Alignment

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6 July 2018

Respiratory viruses in children with cystic fibrosis: viral detection and clinical findings

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6 July 2018

Linking long-term dietary patterns with gut microbial enterotypes

1 reference

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6 July 2018

Oral microbiome profiles: 16S rRNA pyrosequencing and microarray assay comparison

1 reference

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6 July 2018

Culture enriched molecular profiling of the cystic fibrosis airway microbiome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

6 July 2018

Spatial distribution of microbial communities in the cystic fibrosis lung

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

6 July 2018

UCHIME improves sensitivity and speed of chimera detection

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6 July 2018

Topographical continuity of bacterial populations in the healthy human respiratory tract

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6 July 2018

Analysis of the lung microbiome in the "healthy" smoker and in COPD

1 reference

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6 July 2018

Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

1 reference

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6 July 2018

Partitioning core and satellite taxa from within cystic fibrosis lung bacterial communities

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6 July 2018

Association between composition of the human gastrointestinal microbiome and development of fatty liver with choline deficiency

1 reference

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6 July 2018

Phylogenetic and metabolic diversity of bacteria associated with cystic fibrosis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

6 July 2018

Airway microbiota and pathogen abundance in age-stratified cystic fibrosis patients

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

6 July 2018

Pulmonary exacerbations in cystic fibrosis with negative bacterial cultures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

6 July 2018

The Streptococcus milleri population of a cystic fibrosis clinic reveals patient specificity and intraspecies diversity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

6 July 2018

The changing microbial epidemiology in cystic fibrosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

6 July 2018

Changes in cystic fibrosis sputum microbiology in the United States between 1995 and 2008.

1 reference

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6 July 2018

Bacterial community variation in human body habitats across space and time

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

6 July 2018

Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

1 reference

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6 July 2018

Cystic fibrosis pulmonary guidelines: treatment of pulmonary exacerbations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

6 July 2018

Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

6 July 2018

Respiratory microbiology of patients with cystic fibrosis in the United States, 1995 to 2005.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

6 July 2018

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

6 July 2018

Discerning the complexity of community interactions using a Drosophila model of polymicrobial infections

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

6 July 2018

A polymicrobial perspective of pulmonary infections exposes an enigmatic pathogen in cystic fibrosis patients

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

6 July 2018

Molecular detection of multiple emerging pathogens in sputa from cystic fibrosis patients

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

6 July 2018

The Streptococcus milleri group--an unrecognized cause of disease in cystic fibrosis: a case series and literature review

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

6 July 2018

Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

6 July 2018

Molecular identification of bacteria in bronchoalveolar lavage fluid from children with cystic fibrosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

6 July 2018

SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

6 July 2018

Use of 16S rRNA gene profiling by terminal restriction fragment length polymorphism analysis to compare bacterial communities in sputum and mouthwash samples from patients with cystic fibrosis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

6 July 2018

Survey of resistance of Pseudomonas aeruginosa from UK patients with cystic fibrosis to six commonly prescribed antimicrobial agents

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

6 July 2018

Effects of reduced mucus oxygen concentration in airway Pseudomonas infections of cystic fibrosis patients

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

6 July 2018

Microbial pathogenesis in cystic fibrosis: mucoid Pseudomonas aeruginosa and Burkholderia cepacia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

6 July 2018

Antibody response to Prevotella spp. in patients with ventilator-associated pneumonia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

6 July 2018

Effect of aerosolized recombinant human DNase on exacerbations of respiratory symptoms and on pulmonary function in patients with cystic fibrosis. The Pulmozyme Study Group

1 reference

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6 July 2018

Role of alginate in infection with mucoid Pseudomonas aeruginosa in cystic fibrosis

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

6 July 2018

Effect of pulmonary exacerbations on long-term lung function decline in cystic fibrosis.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

27 October 2018

Exacerbation frequency and clinical outcomes in adult patients with cystic fibrosis.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

27 October 2018

Relationship between cystic fibrosis respiratory tract bacterial communities and age, genotype, antibiotics and Pseudomonas aeruginosa.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

27 October 2018

In vitro activity of ceftazidime, ciprofloxacin, meropenem, minocycline, tobramycin and trimethoprim/sulfamethoxazole against planktonic and sessile Burkholderia cepacia complex bacteria

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

27 October 2018

Antibiotic-resistant obligate anaerobes during exacerbations of cystic fibrosis patients

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

27 October 2018

An international/multicentre report on patients with cystic fibrosis (CF) over the age of 40 years.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

27 October 2018

Longitudinal development of mucoid Pseudomonas aeruginosa infection and lung disease progression in children with cystic fibrosis.

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27 October 2018

Colonization of lower respiratory tract with anaerobic bacteria in mechanically ventilated patients.

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27 October 2018

DNA sequence quality trimming and vector removal.

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27 October 2018

Use of culture and molecular analysis to determine the effect of antibiotic treatment on microbial community diversity and abundance during exacerbation in patients with cystic fibrosis

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458854

9 December 2018

Population structure and characterization of viridans group streptococci (VGS) including Streptococcus pneumoniae isolated from adult patients with cystic fibrosis (CF)

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9 December 2018

Detection of Anaerobic Bacteria in High Numbers in Sputum from Patients with Cystic Fibrosis

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9 December 2018

Cystic fibrosis mortality and survival in the UK: 1947-2003

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9 December 2018

Monitoring quality of life in outpatients with cystic fibrosis: feasibility and longitudinal results

1 reference

https://pubmed.ncbi.nlm.nih.gov/23049765

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Relative contribution of Prevotella intermedia and Pseudomonas aeruginosa to lung pathology in airways of patients with cystic fibrosis

1 reference

https://pubmed.ncbi.nlm.nih.gov/23049765

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Adult cystic fibrosis

1 reference

https://pubmed.ncbi.nlm.nih.gov/23049765

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Incidence of anaerobes in ventilator-associated pneumonia with use of a protected specimen brush

1 reference

https://pubmed.ncbi.nlm.nih.gov/23049765

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0045001

1 reference

Europe PubMed Central

2 August 2017

2012PLoSO...745001F

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1 reference

Europe PubMed Central

2 August 2017

1 reference

Europe PubMed Central

2 August 2017

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