Marek's disease virus infection induces widespread differential chromatin marks in inbred chicken lines (Q34448456)

2 August 2017

Marek's disease virus infection induces widespread differential chromatin marks in inbred chicken lines (English)

1 reference

2 August 2017

Apratim Mitra

1

1 reference

2 August 2017

Juan Luo

2

1 reference

2 August 2017

Huanming Zhang

3

1 reference

2 August 2017

Kairong Cui

4

1 reference

2 August 2017

Keji Zhao

5

1 reference

2 August 2017

Jiuzhou Song

6

1 reference

2 August 2017

language of work or name

English

0 references

publication date

16 October 2012

1 reference

2 August 2017

1 reference

2 August 2017

13

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2 August 2017

557

1 reference

describes a project that uses

2 August 2017

DESeq2

object named as

DESeq

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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Temporal transcriptome changes induced by MDV in Marek's disease-resistant and -susceptible inbred chickens

6 July 2018

1 reference

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Systems analysis of immune responses in Marek's disease virus-infected chickens identifies a gene involved in susceptibility and highlights a possible novel pathogenicity mechanism

6 July 2018

1 reference

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Knockdown of CITED2 using short-hairpin RNA sensitizes cancer cells to cisplatin through stabilization of p53 and enhancement of p53-dependent apoptosis

6 July 2018

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Mapping and analysis of chromatin state dynamics in nine human cell types

6 July 2018

1 reference

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The galanin system in cancer

6 July 2018

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The Meq oncoprotein of Marek's disease virus interacts with p53 and inhibits its transcriptional and apoptotic activities

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

Differential expression analysis for sequence count data

6 July 2018

1 reference

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The UCSC Genome Browser database: update 2011

6 July 2018

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Discovery and characterization of chromatin states for systematic annotation of the human genome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

PD-1 and CTLA-4 combination blockade expands infiltrating T cells and reduces regulatory T and myeloid cells within B16 melanoma tumors

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

Tumor suppressor U19/EAF2 regulates thrombospondin-1 expression via p53

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

A clustering approach for identification of enriched domains from histone modification ChIP-Seq data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

Bivalent domains enforce transcriptional memory of DNA methylated genes in cancer cells.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

Marek's disease vaccines: a solution for today but a worry for tomorrow?

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

A mono-allelic bivalent chromatin domain controls tissue-specific imprinting at Grb10

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

Characterization of a newly developed chicken 44K Agilent microarray

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

High-resolution profiling of histone methylations in the human genome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

Increased expression of insulin-like growth factor-II messenger RNA-binding protein 1 is associated with tumor progression in patients with lung cancer

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

Host epigenetic modifications by oncogenic viruses

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

A bivalent chromatin structure marks key developmental genes in embryonic stem cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

Marek's disease virus: from miasma to model

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

Matrix metalloproteinases: roles in cancer and metastasis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

Galanin and galanin receptors in human cancers

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

Use of Marek's disease vaccines: could they be driving the virus to increasing virulence?

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

The BCL6 proto-oncogene suppresses p53 expression in germinal-centre B cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

Expression of the RNA-binding protein CRD-BP in brain and non-small cell lung tumors

6 July 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

6 July 2018

https://api.crossref.org/works/10.1186%2F1471-2164-13-557

Characterization of a spontaneously transformed chicken mononuclear cell line.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

Epstein-Barr virus nuclear antigen 3C recruits histone deacetylase activity and associates with the corepressors mSin3A and NCoR in human B-cell lines

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

8q24 Copy number gains and expression of the c-myc mRNA stabilizing protein CRD-BP in primary breast carcinomas

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

Regulation of life and death by the zinc finger transcription factor Egr-1.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

The Epstein-Barr virus oncogene product, latent membrane protein 1, induces the downregulation of E-cadherin gene expression via activation of DNA methyltransferases

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

p300/CBP proteins: HATs for transcriptional bridges and scaffolds

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

Growth hormone interacts with the Marek's disease virus SORF2 protein and is associated with disease resistance in chicken

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

EGR-1 enhances tumor growth and modulates the effect of the Wilms' tumor 1 gene products on tumorigenicity

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

The role of CTLA-4 in the regulation of T cell immune responses.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

Increased virulence of Marek's disease virus field isolates

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

Apoptosis and CD8-down-regulation in the thymus of chickens infected with Marek's disease virus

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

Characterization of the chicken vimentin gene: single copy gene producing multiple mRNAs

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

Protection against Marek's Disease by Vaccination with a Herpesvirus of Turkeys

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

Immunization against Marek's disease using a live attenuated virus

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

Transformation of T-lymphocyte subsets by Marek's disease herpesvirus

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

Epigenetic chromatin states uniquely define the developmental plasticity of murine hematopoietic stem cells.

6 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-557

A strategy to identify positional candidate genes conferring Marek's disease resistance by integrating DNA microarrays and genetic mapping.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-557

Targeting of marker loci to chicken chromosome 16 by representational difference analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-557

Marek's disease virus-induced immunosuppression: array analysis of chicken immune response gene expression profiling

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-557

Transcriptional profiling of host gene expression in chicken liver tissues infected with oncogenic Marek's disease virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-557

Egr-1 negatively regulates human tumor cell growth via the DNA-binding domain

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

Structure and development of the herpes-types virus of Marek's disease

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505159

Overexpression of an mRNA-binding protein in human colorectal cancer

27 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23072359

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Association between rate of viral genome replication and virulence of Marek's disease herpesvirus strains

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23072359

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Maintenance of Marek's disease herpesvirus latency in vitro by a factor found in conditioned medium

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23072359

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-13-557

1 reference

2 August 2017

1 reference

2 August 2017

1 reference