Identification in a pseudoknot of a U.G motif essential for the regulation of the expression of ribosomal protein S15 (Q34458279)

2 August 2017

title

Identification in a pseudoknot of a U.G motif essential for the regulation of the expression of ribosomal protein S15 (English)

1 reference

ORCID Public Data File 2021

2 August 2017

1 reference

author name string

Bénard L

1

1 reference

2 August 2017

Mathy N

2

1 reference

2 August 2017

Grunberg-Manago M

3

1 reference

2 August 2017

Ehresmann B

4

1 reference

2 August 2017

Ehresmann C

5

1 reference

2 August 2017

Portier C

6

1 reference

2 August 2017

language of work or name

English

0 references

publication date

1 March 1998

1 reference

Proceedings of the National Academy of Sciences of the United States of America

2 August 2017

published in

1 reference

2 August 2017

volume

95

1 reference

2 August 2017

issue

5

1 reference

2 August 2017

page(s)

2564-2567

1 reference

Subtle atomic group discrimination in the RNA minor groove

2 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=19414

Specific atomic groups and RNA helix geometry in acceptor stem recognition by a tRNA synthetase

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=19414

Structure of the acceptor stem of Escherichia coli tRNA Ala: role of the G3.U70 base pair in synthetase recognition

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=19414

Yeast ribosomal protein L32 recognizes an RNA G:U juxtaposition

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=19414

Translational repression by the bacteriophage T4 gene 32 protein involves specific recognition of an RNA pseudoknot structure

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=19414

Pseudoknot-dependent read-through of retroviral gag termination codons: importance of sequences in the spacer and loop 2

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=19414

Divalent metal ion binding to a conserved wobble pair defining the upstream site of cleavage of group I self-splicing introns

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=19414

Structural and functional studies of retroviral RNA pseudoknots involved in ribosomal frameshifting: nucleotides at the junction of the two stems are important for efficient ribosomal frameshifting.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=19414

Minor groove recognition of the conserved G.U pair at the Tetrahymena ribozyme reaction site

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=19414

Mutational analysis of the pseudoknot structure of the S15 translational operator from Escherichia coli.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=19414

Ribosomal protein S15 from Escherichia coli modulates its own translation by trapping the ribosome on the mRNA initiation loading site.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=19414

Structure of the P1 Helix from Group I Self-splicing Introns

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=19414

Analysis of the role of the pseudoknot component in the SRV-1 gag-pro ribosomal frameshift signal: loop lengths and stability of the stem regions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=19414

Molecular dissection of the pseudoknot governing the translational regulation of Escherichia coli ribosomal protein S15.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=19414

An RNA pseudoknot is an essential structural element of the internal ribosome entry site located within the hepatitis C virus 5' noncoding region

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=19414

Rapid and efficient site-specific mutagenesis without phenotypic selection

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=19414

Inhibition of restriction endonuclease Nci I cleavage by phosphorothioate groups and its application to oligonucleotide-directed mutagenesis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=19414

RNA structure, not sequence, determines the 5' splice-site specificity of a group I intron

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=19414

Unusual mRNA pseudoknot structure is recognized by a protein translational repressor

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=19414

Target site of Escherichia coli ribosomal protein S15 on its messenger RNA. Conformation and interaction with the protein

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=19414

Translational autocontrol of the Escherichia coli ribosomal protein S15.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=19414

Mutational analysis of the pseudoknot region in the 3' noncoding region of tobacco mosaic virus RNA.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=19414

Is there a special function for U.G basepairs in ribosomal RNA?

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=19414

Crystal structure of an RNA double helix incorporating a track of non-Watson-Crick base pairs

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=19414

NMR analysis of helix I from the 5S RNA of Escherichia coli

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=19414

Stacking of Crick Wobble pair and Watson-Crick pair: stability rules of G-U pairs at ends of helical stems in tRNAs and the relation to codon-anticodon Wobble interaction

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=19414

Changing the identity of a tRNA by introducing a G-U wobble pair near the 3' acceptor end.

6 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.95.5.2564

A simple structural feature is a major determinant of the identity of a transfer RNA

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.95.5.2564

Functional contacts of a transfer RNA synthetase with 2′-hydroxyl groups in the RNA minor groove

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.95.5.2564

Positive and negative regulations of plasmid CoLIb-P9 repZ gene expression at the translational level

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/9482926

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Functional evidence for indirect recognition of G.U in tRNA(Ala) by alanyl-tRNA synthetase

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/9482926

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.95.5.2564

1 reference

2 August 2017

0 references

1 reference

2 August 2017

1 reference