Comparison of total and cytoplasmic mRNA reveals global regulation by nuclear retention and miRNAs (Q34461292)

2 August 2017

Comparison of total and cytoplasmic mRNA reveals global regulation by nuclear retention and miRNAs (English)

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2 August 2017

Beata Werne Solnestam

1

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2 August 2017

Henrik Stranneheim

2

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2 August 2017

Jimmie Hällman

3

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2 August 2017

Max Käller

4

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2 August 2017

Emma Lundberg

5

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2 August 2017

Joakim Lundeberg

6

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2 August 2017

Pelin Akan

7

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2 August 2017

language of work or name

English

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publication date

30 October 2012

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2 August 2017

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2 August 2017

13

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2 August 2017

574

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describes a project that uses

2 August 2017

DESeq2

object named as

DESeq

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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Nuclear retention of importin α coordinates cell fate through changes in gene expression.

6 July 2018

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Scalable transcriptome preparation for massive parallel sequencing

6 July 2018

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Global quantification of mammalian gene expression control

6 July 2018

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Defining the transcriptome and proteome in three functionally different human cell lines

6 July 2018

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miRTarBase: a database curates experimentally validated microRNA-target interactions

6 July 2018

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Differential expression analysis for sequence count data

6 July 2018

1 reference

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Global signatures of protein and mRNA expression levels

6 July 2018

1 reference

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An abundance of ubiquitously expressed genes revealed by tissue transcriptome sequence data

6 July 2018

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Correlation of mRNA and protein in complex biological samples.

6 July 2018

1 reference

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Microarray analysis of cytoplasmic versus whole cell RNA reveals a considerable number of missed and false positive mRNAs

6 July 2018

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The Sequence Alignment/Map format and SAMtools

6 July 2018

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Universal sample preparation method for proteome analysis

6 July 2018

1 reference

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TopHat: discovering splice junctions with RNA-Seq

6 July 2018

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

6 July 2018

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The exosome contains domains with specific endoribonuclease, exoribonuclease and cytoplasmic mRNA decay activities.

6 July 2018

1 reference

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Mapping and quantifying mammalian transcriptomes by RNA-Seq

6 July 2018

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In-gel digestion for mass spectrometric characterization of proteins and proteomes

6 July 2018

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Folding free energies of 5'-UTRs impact post-transcriptional regulation on a genomic scale in yeast

6 July 2018

1 reference

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Regulating gene expression through RNA nuclear retention

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495644

WebGestalt: an integrated system for exploring gene sets in various biological contexts

6 July 2018

1 reference

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Structural RNA has lower folding energy than random RNA of the same dinucleotide frequency

6 July 2018

1 reference

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Genomic run-on evaluates transcription rates for all yeast genes and identifies gene regulatory mechanisms

6 July 2018

1 reference

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Vienna RNA secondary structure server

6 July 2018

1 reference

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Genome-wide analysis of RNA-protein interactions illustrates specificity of the mRNA export machinery

6 July 2018

1 reference

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AU binding proteins recruit the exosome to degrade ARE-containing mRNAs

6 July 2018

1 reference

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Frequency Distribution of Messenger Sequences within Polysomal mRNA and Nuclear RNA from Rat Liver

6 July 2018

1 reference

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The beginning of the end for microarrays?

6 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2164-13-574

Nuclear and cytoplasmic mRNA quantification by SYBR green based real-time RT-PCR.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2164-13-574

Combination of FASP and StageTip-based fractionation allows in-depth analysis of the hippocampal membrane proteome

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2164-13-574

21 January 2018

Identifiers

DOI

10.1186/1471-2164-13-574

1 reference

2 August 2017

1 reference

2 August 2017

1 reference