Transcription factor binding dynamics during human ES cell differentiation (Q34463538)

2 August 2017

title

Transcription factor binding dynamics during human ES cell differentiation (English)

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2 August 2017

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8

Alexander Meissner

1 reference

2 August 2017

6

Ido Amit

1 reference

2 August 2017

7

Andreas Gnirke

1 reference

2 August 2017

Alexander M Tsankov

1

1 reference

2 August 2017

Hongcang Gu

2

1 reference

2 August 2017

Veronika Akopian

3

1 reference

2 August 2017

Michael J Ziller

4

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2 August 2017

Julie Donaghey

5

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2 August 2017

language of work or name

English

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publication date

1 February 2015

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2 August 2017

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2 August 2017

volume

518

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2 August 2017

issue

7539

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2 August 2017

page(s)

344-349

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Integrative analysis of 111 reference human epigenomes

2 August 2017

cites work

1 reference

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Reorganization of enhancer patterns in transition from naive to primed pluripotency

6 July 2018

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6 July 2018

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6 July 2018

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The cell-cycle state of stem cells determines cell fate propensity.

6 July 2018

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6 July 2018

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Accounting for immunoprecipitation efficiencies in the statistical analysis of ChIP-seq data

6 July 2018

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6 July 2018

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6 July 2018

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Master transcription factors and mediator establish super-enhancers at key cell identity genes

6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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An expansive human regulatory lexicon encoded in transcription factor footprints

6 July 2018

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Inferring direct DNA binding from ChIP-seq

6 July 2018

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FGF signalling inhibits neural induction in human embryonic stem cells

6 July 2018

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Pioneer transcription factors: establishing competence for gene expression

6 July 2018

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Master transcription factors determine cell-type-specific responses to TGF-β signaling

6 July 2018

1 reference

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Epigenome characterization at single base-pair resolution.

6 July 2018

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OCT4 establishes and maintains nucleosome-depleted regions that provide additional layers of epigenetic regulation of its target genes

6 July 2018

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False positive peaks in ChIP-seq and other sequencing-based functional assays caused by unannotated high copy number regions

6 July 2018

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Pluripotency factors in embryonic stem cells regulate differentiation into germ layers

6 July 2018

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Control of the embryonic stem cell state

6 July 2018

1 reference

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Pluripotency factors regulate definitive endoderm specification through eomesodermin

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499331

Densely interconnected transcriptional circuits control cell states in human hematopoiesis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499331

A unique chromatin signature uncovers early developmental enhancers in humans

6 July 2018

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Comparative Epigenomic Analysis of Murine and Human Adipogenesis

6 July 2018

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Mapping the first stages of mesoderm commitment during differentiation of human embryonic stem cells

6 July 2018

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Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities

6 July 2018

1 reference

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Fast and accurate short read alignment with Burrows-Wheeler transform

6 July 2018

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Highly efficient neural conversion of human ES and iPS cells by dual inhibition of SMAD signaling

6 July 2018

1 reference

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6 July 2018

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Highly efficient differentiation of hESCs to functional hepatic endoderm requires ActivinA and Wnt3a signaling

6 July 2018

1 reference

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Genome-scale DNA methylation maps of pluripotent and differentiated cells

6 July 2018

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Genetic programming of liver and pancreas progenitors: lessons for stem-cell differentiation

6 July 2018

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Core transcriptional regulatory circuitry in human embryonic stem cells

6 July 2018

1 reference

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Otx2 regulates subtype specification and neurogenesis in the midbrain

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499331

Transcriptional regulatory code of a eukaryotic genome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499331

GATA transcription factors in the developing and adult heart

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499331

Zinc-finger transcription factor Slug contributes to the function of the stem cell factor c-kit signaling pathway

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499331

Otx1 and Otx2 activities are required for the normal development of the mouse inner ear

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499331

Fitting a mixture model by expectation maximization to discover motifs in biopolymers

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499331

DNA-binding factors shape the mouse methylome at distal regulatory regions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499331

Transposable elements have rewired the core regulatory network of human embryonic stem cells

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499331

Derivation of neural crest cells from human pluripotent stem cells.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499331

Physical and functional interaction of SMADs and p300/CBP

27 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25693565

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NATURE14233

1 reference

Dimensions Publication ID

2 August 2017

0 references

1 reference

2 August 2017

1 reference