Comparative analysis of genome sequences covering the seven cronobacter species (Q34482364)

2 August 2017

Comparative analysis of genome sequences covering the seven cronobacter species (English)

1 reference

2 August 2017

Nadia Chuzhanova

13

0 references

Stephen J. Forsythe

Stephen J Forsythe

16

0 references

Michael McClelland

Michael McClelland

14

0 references

author name string

Susan Joseph

1

1 reference

2 August 2017

Prerak Desai

2

1 reference

2 August 2017

Yongmei Ji

3

1 reference

2 August 2017

Craig A Cummings

4

1 reference

2 August 2017

Rita Shih

5

1 reference

2 August 2017

Lovorka Degoricija

6

1 reference

2 August 2017

Alain Rico

7

1 reference

2 August 2017

Pius Brzoska

8

1 reference

2 August 2017

Stephen E Hamby

9

1 reference

2 August 2017

Naqash Masood

10

1 reference

2 August 2017

Sumyya Hariri

11

1 reference

2 August 2017

Hana Sonbol

12

1 reference

2 August 2017

Manohar R Furtado

15

1 reference

2 August 2017

language of work or name

English

0 references

publication date

16 November 2012

1 reference

2 August 2017

1 reference

2 August 2017

7

1 reference

2 August 2017

11

1 reference

2 August 2017

e49455

1 reference

Creative Commons Attribution 4.0 International

2 August 2017

start time

16 November 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

MIRA

MIRA

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

MUMmer

MUMmer

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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Cronobacter condimenti sp. nov., isolated from spiced meat, and Cronobacter universalis sp. nov., a species designation for Cronobacter sp. genomospecies 1, recovered from a leg infection, water and food ingredients

6 July 2018

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Genetic analysis of the Cronobacter sakazakii O4 to O7 O-antigen gene clusters and development of a PCR assay for identification of all C. sakazakii O serotypes

6 July 2018

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Hcp family proteins secreted via the type VI secretion system coordinately regulate Escherichia coli K1 interaction with human brain microvascular endothelial cells

6 July 2018

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Genome sequence of Cronobacter sakazakii E899, a strain associated with human illness

6 July 2018

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In Silico identification of pathogenic strains of Cronobacter from Biochemical data reveals association of inositol fermentation with pathogenicity

6 July 2018

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Predominance of Cronobacter sakazakii sequence type 4 in neonatal infections

6 July 2018

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MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

6 July 2018

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Molecular characterization of Cronobacter lipopolysaccharide O-antigen gene clusters and development of serotype-specific PCR assays

6 July 2018

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Characterization of putative virulence genes on the related RepFIB plasmids harbored by Cronobacter spp

6 July 2018

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Development of an O-antigen serotyping scheme for Cronobacter sakazakii

6 July 2018

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Comparative genomics of the bacterial genus Listeria: Genome evolution is characterized by limited gene acquisition and limited gene loss

6 July 2018

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Complete genome sequence of Cronobacter turicensis LMG 23827, a food-borne pathogen causing deaths in neonates

6 July 2018

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Outer membrane proteins A (OmpA) and X (OmpX) are essential for basolateral invasion of Cronobacter sakazakii

6 July 2018

1 reference

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Genome sequence of Cronobacter sakazakii BAA-894 and comparative genomic hybridization analysis with other Cronobacter species

6 July 2018

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The CRISPR system: small RNA-guided defense in bacteria and archaea

6 July 2018

1 reference

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Multilocus sequence typing of Cronobacter sakazakii and Cronobacter malonaticus reveals stable clonal structures with clinical significance which do not correlate with biotypes

6 July 2018

1 reference

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Neonatal enteral feeding tubes as loci for colonisation by members of the Enterobacteriaceae

6 July 2018

1 reference

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Desiccation resistance and persistence of Cronobacter species in infant formula

6 July 2018

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Microbial comparative pan-genomics using binomial mixture models

6 July 2018

1 reference

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Insights into the evolution of sialic acid catabolism among bacteria

6 July 2018

1 reference

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A rapid bootstrap algorithm for the RAxML Web servers

6 July 2018

1 reference

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Molecular analysis of the Enterobacter sakazakii O-antigen gene locus

6 July 2018

1 reference

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Virulence studies of Enterobacter sakazakii isolates associated with a neonatal intensive care unit outbreak

6 July 2018

1 reference

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Velvet: algorithms for de novo short read assembly using de Bruijn graphs

6 July 2018

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The RAST Server: rapid annotations using subsystems technology

6 July 2018

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Enterobacter sakazakii invasion in human intestinal Caco-2 cells requires the host cell cytoskeleton and is enhanced by disruption of tight junction

6 July 2018

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Evolution of the chaperone/usher assembly pathway: fimbrial classification goes Greek

6 July 2018

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Genotypic and phenotypic analysis of Enterobacter sakazakii strains from an outbreak resulting in fatalities in a neonatal intensive care unit in France

6 July 2018

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Dry stress and survival time of Enterobacter sakazakii and other Enterobacteriaceae in dehydrated powdered infant formula

6 July 2018

1 reference

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Characterization of the zinc-containing metalloprotease encoded by zpx and development of a species-specific detection method for Enterobacter sakazakii

6 July 2018

1 reference

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The taxonomy of Enterobacter sakazakii: proposal of a new genus Cronobacter gen. nov. and descriptions of Cronobacter sakazakii comb. nov. Cronobacter sakazakii subsp. sakazakii, comb. nov., Cronobacter sakazakii subsp. malonaticus subsp. nov., [...]

6 July 2018

1 reference

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Enterobacter sakazakii in food and beverages (other than infant formula and milk powder).

6 July 2018

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Inference of bacterial microevolution using multilocus sequence data

6 July 2018

1 reference

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PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments

6 July 2018

1 reference

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Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3500316

Escherichia coli K1 RS218 interacts with human brain microvascular endothelial cells via type 1 fimbria bacteria in the fimbriated state

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3500316

Identification and phylogeny of Enterobacter sakazakii relative to Enterobacter and Citrobacter Species

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3500316

The complete nucleotide sequence of the resistance plasmid R478: defining the backbone components of incompatibility group H conjugative plasmids through comparative genomics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3500316

MUSCLE: multiple sequence alignment with high accuracy and high throughput

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3500316

Versatile and open software for comparing large genomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3500316

OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3500316

Type IV pili and twitching motility

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3500316

BLAT—The BLAST-Like Alignment Tool

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3500316

Enterobacter sakazakii infections among neonates, infants, children, and adults. Case reports and a review of the literature

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3500316

Outbreak of necrotizing enterocolitis associated with Enterobacter sakazakii in powdered milk formula

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3500316

Enterobacter sakazakii brain abscess in the neonate: the importance of neuroradiologic imaging

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3500316

Serotype-converting bacteriophages and O-antigen modification in Shigella flexneri

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3500316

BglR protein, which belongs to the BglG family of transcriptional antiterminators, is involved in beta-glucoside utilization in Lactococcus lactis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3500316

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3500316

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3500316

Evolutionary trees from DNA sequences: A maximum likelihood approach

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3500316

Enterobacter sakazakii meningitis in neonates

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3500316

Three cases of neonatal meningitis caused by Enterobacter sakazakii in powdered milk.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3500316

The Cronobacter genus: ubiquity and diversity

6 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0049455

Enterobacter sakazakii: A New Species of "Enterobacteriaceae" Isolated from Clinical Specimens

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0049455

Prophinder: a computational tool for prophage prediction in prokaryotic genomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0049455

A top-down proteomics approach for differentiating thermal resistant strains of Enterobacter sakazakii.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0049455

Genetic characterization of thermal tolerance in Enterobacter sakazakii

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0049455

Biofilm formation on enteral feeding tubes by Cronobacter sakazakii, Salmonella serovars and other Enterobacteriaceae.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0049455

Structure of the antigenic repeating pentasaccharide unit of the LPS O-polysaccharide of Cronobacter sakazakii implicated in the Tennessee outbreak

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0049455

Characterization of the O-antigen in the lipopolysaccharide of Cronobacter (Enterobacter) malonaticus 3267.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0049455

The structure of the O-antigen in the endotoxin of the emerging food pathogen Cronobacter (Enterobacter) muytjensii strain 3270.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0049455

A selective differential medium for Enterobacter sakazakii, a preliminary study

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0049455

Inference from Iterative Simulation Using Multiple Sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0049455

Virulence traits in Cronobacter species isolated from different sources.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3500316

Analysis of the DNA region mediating increased thermotolerance at 58°C in Cronobacter sp. and other enterobacterial strains.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3500316

Enterobacter sakazakii invades brain capillary endothelial cells, persists in human macrophages influencing cytokine secretion and induces severe brain pathology in the neonatal rat

27 October 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0049455

Structure of the O-polysaccharide isolated from Cronobacter sakazakii 767

21 January 2018

1 reference

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Structure and genetics of the O-antigen of Cronobacter sakazakii G2726 (serotype O3) closely related to the O-antigen of C. muytjensii 3270

21 January 2018

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12 December 2020

From the Centers for Disease Control and Prevention. Enterobacter sakazakii infections associated with the use of powdered infant formula--Tennessee, 2001

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12 December 2020

Enterobacter sakazakii: infectivity and enterotoxin production in vitro and in vivo

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12 December 2020

Occurrence of Enterobacter sakazakii in food production environments and households

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12 December 2020

10.1371/JOURNAL.PONE.0049455

Identifiers

DOI

1 reference

2 August 2017

0 references

1 reference

2 August 2017

1 reference