Performance of genotypic algorithms for predicting HIV-1 tropism measured against the enhanced-sensitivity Trofile coreceptor tropism assay (Q34489614)

2 August 2017

title

Performance of genotypic algorithms for predicting HIV-1 tropism measured against the enhanced-sensitivity Trofile coreceptor tropism assay (English)

1 reference

2 August 2017

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Victoria Sánchez

1

1 reference

2 August 2017

Mar Masiá

2

1 reference

2 August 2017

Catalina Robledano

3

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2 August 2017

Sergio Padilla

4

1 reference

2 August 2017

José Manuel Ramos

5

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2 August 2017

Félix Gutiérrez

6

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2 August 2017

language of work or name

English

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publication date

22 September 2010

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Journal of Clinical Microbiology

2 August 2017

published in

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2 August 2017

volume

48

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2 August 2017

issue

11

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2 August 2017

page(s)

4135-4139

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Current tests to evaluate HIV-1 coreceptor tropism

2 August 2017

cites work

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Improvement in the determination of HIV-1 tropism using the V3 gene sequence and a combination of bioinformatic tools

6 July 2018

1 reference

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Reliability of rapid subtyping tools compared to that of phylogenetic analysis for characterization of human immunodeficiency virus type 1 non-B subtypes and recombinant forms

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3020874

HIV coreceptor phenotyping in the clinical setting.

6 July 2018

1 reference

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Evaluation of eight different bioinformatics tools to predict viral tropism in different human immunodeficiency virus type 1 subtypes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3020874

Phenotypic assays for the determination of coreceptor tropism in HIV-1 infected individuals.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3020874

Structural descriptors of gp120 V3 loop for the prediction of HIV-1 coreceptor usage

6 July 2018

1 reference

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Population-based sequencing of the V3 region of env for predicting the coreceptor usage of human immunodeficiency virus type 1 quasispecies

6 July 2018

1 reference

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Prevalence of X4 tropic viruses in patients recently infected with HIV-1 and lack of association with transmission of drug resistance

6 July 2018

1 reference

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Development and characterization of a novel single-cycle recombinant-virus assay to determine human immunodeficiency virus type 1 coreceptor tropism

6 July 2018

1 reference

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Prevalence of CXCR4 tropism among antiretroviral-treated HIV-1-infected patients with detectable viremia

6 July 2018

1 reference

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HIV-1 coreceptor usage, transmission, and disease progression

6 July 2018

1 reference

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A highly sensitive and specific model for predicting HIV-1 tropism in treatment-experienced patients combining interpretation of V3 loop sequences and clinical parameters.

6 July 2018

1 reference

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Design and validation of new genotypic tools for easy and reliable estimation of HIV tropism before using CCR5 antagonists.

27 October 2018

1 reference

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Correlation between genotypic predictions based on V3 sequences and phenotypic determination of HIV-1 tropism

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3020874

Current V3 genotyping algorithms are inadequate for predicting X4 co-receptor usage in clinical isolates.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3020874

Determining human immunodeficiency virus coreceptor use in a clinical setting: degree of correlation between two phenotypic assays and a bioinformatic model

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3020874

Correlation between a phenotypic assay and three bioinformatic tools for determining HIV co-receptor use

27 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20861336

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Bioinformatics prediction of HIV coreceptor usage

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20861336

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/JCM.01204-10

1 reference

2 August 2017

1 reference

2 August 2017

1 reference