Improving evolutionary models of protein interaction networks (Q34540064)

2 August 2017

title

Improving evolutionary models of protein interaction networks (English)

1 reference

2 August 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21067999

modelling biological systems

24 August 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21067999

24 August 2024

author name string

Todd A. Gibson

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21067999

24 August 2024

Debra S. Goldberg

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21067999

24 August 2024

language of work or name

English

0 references

publication date

9 November 2010

1 reference

2 August 2017

number of pages

7

1 reference

full work available at URL

inferred from page(s)

https://europepmc.org/articles/pmc3031028?pdf=render

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21067999

http://bioinformatics.oxfordjournals.org/cgi/content/abstract/27/3/376

24 August 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21067999

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/21067999/pdf/?tool=EBI

24 August 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21067999

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/21067999/?tool=EBI

24 August 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21067999

https://europepmc.org/articles/PMC3031028

24 August 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21067999

https://europepmc.org/articles/PMC3031028?pdf=render

24 August 2024

content deliverer

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21067999

https://doi.org/10.1093/bioinformatics/btq623

24 August 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21067999

https://academic.oup.com/bioinformatics/article-pdf/27/3/376/48863326/bioinformatics_27_3_376.pdf

24 August 2024

1 reference

10.1093/BIOINFORMATICS/BTQ623

DOI

https://api.crossref.org/works/10.1093/BIOINFORMATICS/BTQ623

24 August 2024

1 reference

2 August 2017

volume

27

1 reference

2 August 2017

issue

3

1 reference

2 August 2017

page(s)

376-382

1 reference

Questioning the ubiquity of neofunctionalization

2 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031028

Specificity and evolvability in eukaryotic protein interaction networks

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031028

Rapid and asymmetric divergence of duplicate genes in the human gene coexpression network

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031028

Multi-domain proteins in the three kingdoms of life: orphan domains and other unassigned regions.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031028

Rapid subfunctionalization accompanied by prolonged and substantial neofunctionalization in duplicate gene evolution

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031028

Structure and evolution of protein interaction networks: a statistical model for link dynamics and gene duplications

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031028

Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031028

Assessing experimentally derived interactions in a small world

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031028

Analysis of phosphorylation-dependent protein-protein interactions using a bacterial two-hybrid system

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031028

Domain combinations in archaeal, eubacterial and eukaryotic proteomes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031028

The structure of scientific collaboration networks

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031028

The evolutionary fate and consequences of duplicate genes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031028

Collective dynamics of 'small-world' networks

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031028

Consistent patterns of rate asymmetry and gene loss indicate widespread neofunctionalization of yeast genes after whole-genome duplication

7 July 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ623

Modeling interactome: scale-free or geometric?

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ623

Modeling of Protein Interaction Networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ623

Reverse engineering the evolution of protein interaction networks.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031028

The yeast protein interaction network evolves rapidly and contains few redundant duplicate genes

27 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21067999

12 December 2020

inferred from PubMed ID database lookup

Asymmetric functional divergence of duplicate genes in yeast

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21067999

12 December 2020

inferred from PubMed ID database lookup

How the global structure of protein interaction networks evolves

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21067999

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1093/BIOINFORMATICS/BTQ623

1 reference

journals/bioinformatics/GibsonG11

2 August 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

2 August 2017

1 reference