The Genboree Microbiome Toolset and the analysis of 16S rRNA microbial sequences (Q34548785)

3 August 2017

The Genboree Microbiome Toolset and the analysis of 16S rRNA microbial sequences (English)

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3 August 2017

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Maria Alejandra Diaz

11

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Kjersti M Aagaard

13

object named as

Kjersti Aagaard

1 reference

3 August 2017

Aleksandar Milosavljevic

15

object named as

Aleksandar Milosavljevic

1 reference

3 August 2017

Kevin Riehle

1

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3 August 2017

Cristian Coarfa

2

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3 August 2017

Andrew Jackson

3

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3 August 2017

Jun Ma

4

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3 August 2017

Arpit Tandon

5

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3 August 2017

Sameer Paithankar

6

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3 August 2017

Sriram Raghuraman

7

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3 August 2017

Toni-Ann Mistretta

8

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3 August 2017

Delphine Saulnier

9

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3 August 2017

Sabeen Raza

10

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3 August 2017

Robert Shulman

12

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3 August 2017

James Versalovic

14

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3 August 2017

24 August 2012

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3 August 2017

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3 August 2017

13 Suppl 13

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3 August 2017

S11

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https://scigraph.springernature.com/pub.10.1186/1471-2105-13-s13-s11

3 August 2017

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cites work

Gastrointestinal microbiome signatures of pediatric patients with irritable bowel syndrome.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426808

Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426808

Search and clustering orders of magnitude faster than BLAST

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426808

QIIME allows analysis of high-throughput community sequencing data

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426808

Forensic identification using skin bacterial communities

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426808

A human gut microbial gene catalogue established by metagenomic sequencing

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426808

Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426808

Microbial community profiling for human microbiome projects: Tools, techniques, and challenges

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426808

A core gut microbiome in obese and lean twins

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426808

Symbiotic gut microbes modulate human metabolic phenotypes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426808

The human microbiome project

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426808

Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426808

Quantitative and qualitative beta diversity measures lead to different insights into factors that structure microbial communities

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426808

Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426808

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426808

UniFrac: a new phylogenetic method for comparing microbial communities

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426808

Temperature gradient gel electrophoresis analysis of 16S rRNA from human fecal samples reveals stable and host-specific communities of active bacteria.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3426808

10.1186/1471-2105-13-S13-S11

7 July 2018

Identifiers

DOI

1 reference

journals/bmcbi/RiehleCJMTPRMSRDSAVM12

3 August 2017

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

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1 reference

3 August 2017

1 reference