Transcriptional profiling of the Arabidopsis abscission mutant hae hsl2 by RNA-Seq (Q34552891)

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22 February 2020

title

Transcriptional profiling of the Arabidopsis abscission mutant hae hsl2 by RNA-Seq (English)

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22 February 2020

0 references

1 reference

1

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22 February 2020

John C. Walker

series ordinal

3

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22 February 2020

author name string

O Rahul Patharkar

series ordinal

2

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22 February 2020

language of work or name

English

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publication date

17 January 2013

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22 February 2020

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22 February 2020

volume

14

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22 February 2020

page(s)

37

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describes a project that uses

22 February 2020

limma

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limma

2 references

22 June 2022

https://europepmc.org/article/PMC/3566969

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

DESeq2

object named as

DESeq

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

1 reference

HTSeq--a Python framework to work with high-throughput sequencing data

1 reference

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Petal abscission in rose is associated with the differential expression of two ethylene-responsive xyloglucan endotransglucosylase/hydrolase genes, RbXTH1 and RbXTH2

7 July 2018

1 reference

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1 reference

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Three Arabidopsis fatty acyl-coenzyme A reductases, FAR1, FAR4, and FAR5, generate primary fatty alcohols associated with suberin deposition.

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1 reference

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1 reference

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1 reference

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Regulation of floral organ abscission in Arabidopsis thaliana.

7 July 2018

1 reference

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7 July 2018

1 reference

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7 July 2018

1 reference

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Stamen abscission zone transcriptome profiling reveals new candidates for abscission control: enhanced retention of floral organs in transgenic plants overexpressing Arabidopsis ZINC FINGER PROTEIN2.

7 July 2018

1 reference

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1 reference

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Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis

7 July 2018

1 reference

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7 July 2018

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7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3566969

Inflorescence deficient in abscission controls floral organ abscission in Arabidopsis and identifies a novel family of putative ligands in plants

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3566969

Abscission, dehiscence, and other cell separation processes.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3566969

Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3566969

Temporal and spatial expression of a polygalacturonase during leaf and flower abscission in oilseed rape and Arabidopsis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3566969

Gene Expression Omnibus: NCBI gene expression and hybridization array data repository

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3566969

Cutting loose. Abscission and dehiscence in Arabidopsis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3566969

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7 July 2018

1 reference

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HAESA, an Arabidopsis leucine-rich repeat receptor kinase, controls floral organ abscission

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3566969

Primer3 on the WWW for general users and for biologist programmers

7 July 2018

1 reference

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Early flower development in Arabidopsis

7 July 2018

1 reference

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The EPIP peptide of INFLORESCENCE DEFICIENT IN ABSCISSION is sufficient to induce abscission in arabidopsis through the receptor-like kinases HAESA and HAESA-LIKE2.

7 July 2018

1 reference

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Silencing polygalacturonase expression inhibits tomato petiole abscission

21 January 2018

1 reference

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Ethylene induced cotton leaf abscission is associated with higher expression of cellulase (GhCel1) and increased activities of ethylene biosynthesis enzymes in abscission zone

21 January 2018

1 reference

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Expression of polygalacturonases and evidence to support their role during cell separation processes in Arabidopsis thaliana.

21 January 2018

1 reference

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ARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE1 (ADPG1), ADPG2, and QUARTET2 are Polygalacturonases required for cell separation during reproductive development in Arabidopsis

21 January 2018

1 reference

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Ethylene-dependent and -independent pathways controlling floral abscission are revealed to converge using promoter::reporter gene constructs in the ida abscission mutant

21 January 2018

1 reference

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Silencing of the mitogen-activated protein kinase MPK6 compromises disease resistance in Arabidopsis

21 January 2018

1 reference

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21 January 2018

1 reference

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EIN4 and ERS2 are members of the putative ethylene receptor gene family in Arabidopsis

21 January 2018

1 reference

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27 October 2018

1 reference

12 December 2020

The acyltransferase GPAT5 is required for the synthesis of suberin in seed coat and root of Arabidopsis

1 reference

12 December 2020

Phosphorylation of 1-aminocyclopropane-1-carboxylic acid synthase by MPK6, a stress-responsive mitogen-activated protein kinase, induces ethylene biosynthesis in Arabidopsis

1 reference

12 December 2020

Analysis of gene promoters for two tomato polygalacturonases expressed in abscission zones and the stigma

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2164-14-37

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23327667%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23327667%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

PubMed publication ID

23327667

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23327667%20AND%20SRC:MED&resulttype=core&format=json