Complete genome sequence of Pedobacter heparinus type strain (HIM 762-3). (Q34558488)

3 August 2017

Complete genome sequence of Pedobacter heparinus type strain (HIM 762-3). (English)

1 reference

3 August 2017

0 references

whole genome sequencing

1 reference

1 reference

14

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3 August 2017

27

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3 August 2017

30

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33

1 reference

3 August 2017

3

Alla Lapidus

0 references

Hans-Peter Klenk

34

Hans-Peter Klenk

0 references

Tijana Glavina Del Rio

4

Tijana Glavina Del Rio

0 references

Philip Hugenholtz

32

Philip Hugenholtz

0 references

Miriam Land

20

Miriam Land

1 reference

3 August 2017

Cliff Han

1

0 references

Sam Pitluck

13

Sam Pitluck

1 reference

3 August 2017

31

Victor Markowitz

1 reference

3 August 2017

17

Amrita Pati

1 reference

3 August 2017

7

Jan-Fang Cheng

1 reference

3 August 2017

26

Thomas Brettin

1 reference

3 August 2017

Konstantinos Mavromatis

15

Konstantinos Mavromatis

1 reference

3 August 2017

12

Lynne Goodwin

1 reference

3 August 2017

16

Natalia Mikhailova

1 reference

3 August 2017

21

Loren Hauser

1 reference

3 August 2017

19

Krishna Palaniappan

1 reference

3 August 2017

10

Matt Nolan

1 reference

3 August 2017

18

Amy Chen

1 reference

3 August 2017

8

Susan Lucas

1 reference

3 August 2017

5

Hope Tice

1 reference

3 August 2017

35

John C Detter

1 reference

3 August 2017

6

Alex Copeland

1 reference

3 August 2017

28

Manfred Rohde

1 reference

3 August 2017

25

Olga Chertkov

1 reference

3 August 2017

11

David Bruce

1 reference

3 August 2017

22

Yun-Juan Chang

1 reference

3 August 2017

29

Jim Bristow

1 reference

3 August 2017

2

Stefan Spring

1 reference

3 August 2017

Feng Chen

9

1 reference

3 August 2017

Cynthia C Jeffries

23

1 reference

3 August 2017

Elizabeth Saunders

24

1 reference

3 August 2017

20 July 2009

1 reference

Standards in genomic sciences

3 August 2017

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3 August 2017

1

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3 August 2017

1

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3 August 2017

54-62

1 reference

https://scigraph.springernature.com/pub.10.4056/sigs.22138

3 August 2017

0 references

cites work

IMG ER: a system for microbial genome annotation expert review and curation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

A rapid bootstrap algorithm for the RAxML Web servers

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

The minimum information about a genome sequence (MIGS) specification

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

Pedobacter panaciterrae sp. nov., isolated from soil in South Korea

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

Effect of nutrient periodicity on microbial community dynamics

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

Crystal structure of heparinase II from Pedobacter heparinus and its complex with a disaccharide product

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

Expression system for high levels of GAG lyase gene expression and study of the hepA upstream region in Flavobacterium heparinum

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

Multiple sequence alignment using partial order graphs

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

Gene ontology: tool for the unification of biology

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

Crystal structure of chondroitinase B from Flavobacterium heparinum and its complex with a disaccharide product at 1.7 A resolution

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. proposal of the family Sphi

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

Heparinase production by Flavobacterium heparinum

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

In vitro suppression of fungi caused by combinations of apparently non-antagonistic soil bacteria.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035210

The degradation of heparin by bacterial enzymes. I. Adaptation and lyophilized cells

27 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21304637

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Sequential degradation of heparin in Flavobacterium heparinum. Purification and properties of five enzymes involved in heparin degradation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21304637

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.4056/SIGS.22138

1 reference

Dimensions Publication ID

3 August 2017

0 references

1 reference

3 August 2017

1 reference