Genome variation in Cryptococcus gattii, an emerging pathogen of immunocompetent hosts. (Q34565901)

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22 January 2020

title

Genome variation in Cryptococcus gattii, an emerging pathogen of immunocompetent hosts (English)

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22 January 2020

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22 January 2020

James Galagan

40

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22 January 2020

Christina A Cuomo

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22 January 2020

Sarah Kidd

9

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22 January 2020

James Fraser

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22 January 2020

Wieland Meyer

25

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22 January 2020

Dee Carter

26

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22 January 2020

Steven Jones

37

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22 January 2020

Robert A. Holt

38

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22 January 2020

3

G Taylor

1 reference

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22 January 2020

J Wang

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author name string

C A D'Souza

1

1 reference

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22 January 2020

J W Kronstad

2

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22 January 2020

R Warren

4

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22 January 2020

M Yuen

5

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22 January 2020

G Hu

6

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22 January 2020

W H Jung

7

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22 January 2020

A Sham

8

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22 January 2020

K Tangen

10

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22 January 2020

N Lee

11

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22 January 2020

T Zeilmaker

12

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22 January 2020

J Sawkins

13

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22 January 2020

G McVicker

14

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22 January 2020

S Shah

15

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S Gnerre

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A Griggs

17

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22 January 2020

Q Zeng

18

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K Bartlett

19

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W Li

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22 January 2020

X Wang

21

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22 January 2020

J Heitman

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J Schein

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M Krzywinski

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22 January 2020

K J Kwon-Chung

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A Varma

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R Brunham

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22 January 2020

M Fyfe

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22 January 2020

B F F Ouellette

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22 January 2020

A Siddiqui

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22 January 2020

M Marra

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22 January 2020

B W Birren

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22 January 2020

publication date

8 February 2011

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22 January 2020

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22 January 2020

volume

2

1 reference

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22 January 2020

issue

1

1 reference

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22 January 2020

page(s)

e00342-10

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Survival defects of Cryptococcus neoformans mutants exposed to human cerebrospinal fluid result in attenuated virulence in an experimental model of meningitis

22 January 2020

cites work

1 reference

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Role of an Expanded Inositol Transporter Repertoire in Cryptococcus neoformans Sexual Reproduction and Virulence

7 July 2018

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Cryptococcal cell morphology affects host cell interactions and pathogenicity

7 July 2018

1 reference

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Fungal cell gigantism during mammalian infection

7 July 2018

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Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus)

7 July 2018

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Ecological niche modeling of Cryptococcus gattii in British Columbia, Canada

7 July 2018

1 reference

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Emergence and pathogenicity of highly virulent Cryptococcus gattii genotypes in the northwest United States

7 July 2018

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Heteroresistance of Cryptococcus gattii to fluconazole

7 July 2018

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Cryptococcus neoformans overcomes stress of azole drugs by formation of disomy in specific multiple chromosomes

7 July 2018

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Cryptococcus neoformans and Cryptococcus gattii genes preferentially expressed during rat macrophage infection

7 July 2018

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Epidemiology of Cryptococcus gattii, British Columbia, Canada, 1999-2007.

7 July 2018

1 reference

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Fungi evolved right on track

7 July 2018

1 reference

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SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building

7 July 2018

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Spread ofCryptococcus gattiiinto Pacific Northwest Region of the United States

7 July 2018

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The fatal fungal outbreak on Vancouver Island is characterized by enhanced intracellular parasitism driven by mitochondrial regulation

7 July 2018

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Cryptococcus gattii isolates from the British Columbia cryptococcosis outbreak induce less protective inflammation in a murine model of infection than Cryptococcus neoformans

7 July 2018

1 reference

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Genetic diversity of the Cryptococcus species complex suggests that Cryptococcus gattii deserves to have varieties.

7 July 2018

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trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

7 July 2018

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Cryptococcus gattii: An Emerging Cause of Fungal Disease in North America

7 July 2018

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Consensus multi-locus sequence typing scheme for Cryptococcus neoformans and Cryptococcus gattii

7 July 2018

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Apollo: a community resource for genome annotation editing

7 July 2018

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Chromosomal rearrangements between serotype A and D strains in Cryptococcus neoformans

7 July 2018

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A constitutively active GPCR governs morphogenic transitions in Cryptococcus neoformans

7 July 2018

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Molecular evidence that the range of the Vancouver Island outbreak of Cryptococcus gattii infection has expanded into the Pacific Northwest in the United States

7 July 2018

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Estimation of the current global burden of cryptococcal meningitis among persons living with HIV/AIDS

7 July 2018

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Cryptococcus gattii with bimorphic colony types in a dog in western Oregon: additional evidence for expansion of the Vancouver Island outbreak

7 July 2018

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Computational modeling and in silico analysis of differential regulation of myo-inositol catabolic enzymes in Cryptococcus neoformans

7 July 2018

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Comparative hybridization reveals extensive genome variation in the AIDS-associated pathogen Cryptococcus neoformans

7 July 2018

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Malassezia globosa and restricta: breakthrough understanding of the etiology and treatment of dandruff and seborrheic dermatitis through whole-genome analysis

7 July 2018

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Spread of Cryptococcus gattii in British Columbia, Canada, and detection in the Pacific Northwest, USA

7 July 2018

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Transcriptional regulation by protein kinase A in Cryptococcus neoformans.

7 July 2018

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Chromosome instability in Candida albicans

7 July 2018

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Creating a honey bee consensus gene set

7 July 2018

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Black holes, antivirulence genes, and gene inactivation in the evolution of bacterial pathogens

7 July 2018

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Characterization of environmental sources of the human and animal pathogen Cryptococcus gattii in British Columbia, Canada, and the Pacific Northwest of the United States

7 July 2018

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Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis

7 July 2018

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Evolution and diversification of RNA silencing proteins in fungi

7 July 2018

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Approximate likelihood-ratio test for branches: A fast, accurate, and powerful alternative

7 July 2018

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Physical map-assisted whole-genome shotgun sequence assemblies

7 July 2018

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CAFE: a computational tool for the study of gene family evolution

7 July 2018

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Cryptococcus gattii in AIDS patients, southern California

7 July 2018

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Prevalence of clinical isolates of Cryptococcus gattii serotype C among patients with AIDS in Sub-Saharan Africa

7 July 2018

1 reference

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Estimating the tempo and mode of gene family evolution from comparative genomic data

7 July 2018

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Atlas - a data warehouse for integrative bioinformatics

7 July 2018

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Chromosomal translocation and segmental duplication in Cryptococcus neoformans

7 July 2018

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The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans

7 July 2018

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Cryptococcus neoformans isolates from transplant recipients are not selected for resistance to calcineurin inhibitors by current immunosuppressive regimens

7 July 2018

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A rare genotype of Cryptococcus gattii caused the cryptococcosis outbreak on Vancouver Island (British Columbia, Canada)

7 July 2018

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MUSCLE: a multiple sequence alignment method with reduced time and space complexity

7 July 2018

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Genome sequence of the lignocellulose degrading fungus Phanerochaete chrysosporium strain RP78

7 July 2018

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Pegasys: software for executing and integrating analyses of biological sequences

7 July 2018

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Versatile and open software for comparing large genomes

7 July 2018

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Cryptococcus neoformans gene expression during experimental cryptococcal meningitis

7 July 2018

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A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

7 July 2018

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OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes

7 July 2018

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Molecular typing of IberoAmerican Cryptococcus neoformans isolates

7 July 2018

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Apollo: a sequence annotation editor

7 July 2018

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The role of mating type and morphology in Cryptococcus neoformans pathogenesis.

7 July 2018

1 reference

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Genetics of Cryptococcus neoformans

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

Physical maps for genome analysis of serotype A and D strains of the fungal pathogen Cryptococcus neoformans

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

PatternHunter: faster and more sensitive homology search

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

An efficient algorithm for large-scale detection of protein families

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

ARACHNE: a whole-genome shotgun assembler

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

Chromosomal rearrangements and speciation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

Ab initio gene finding in Drosophila genomic DNA

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

Phenotypic switching in Cryptococcus neoformans results in changes in cellular morphology and glucuronoxylomannan structure

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

Molecular mechanisms of chromosomal rearrangement in fungi.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

Ferrous iron uptake in Cryptococcus neoformans

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

Determination of ploidy in Cryptococcus neoformans by flow cytometry

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

Role of catechol siderophore synthesis in Vibrio vulnificus virulence

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

Chromosome-length polymorphism in fungi

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

dbEST--database for "expressed sequence tags"

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

Identification of common molecular subsequences

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

Epidemiologic differences between the two varieties of Cryptococcus neoformans

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

Biosynthesis of the iron-transport compound enterochelin: mutants of Escherichia coli unable to synthesize 2,3-dihydroxybenzoate

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

Extracellular iron chelation in Cryptococcus neoformans.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

An evaluation of the molecular clock hypothesis using mammalian DNA sequences

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

Basic local alignment search tool

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

Natural habitat of Cryptococcus neoformans var. gattii

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

The Ecology of Cryptococcus neoformans and the Epidemiology of Cryptococcosis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

The rapid generation of mutation data matrices from protein sequences

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

Using geneid to identify genes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

The emergence of Cryptococcus gattii in British Columbia and the Pacific Northwest.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

Estimating divergence times in large phylogenetic trees

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

Recent evolution of the human pathogen Cryptococcus neoformans by intervarietal transfer of a 14-gene fragment

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

Hetero-resistance: an under-recognised confounder in diagnosis and therapy?

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

Cryptococcus neoformans variety gattii

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

The dhb operon of Bacillus subtilis encodes the biosynthetic template for the catecholic siderophore 2,3-dihydroxybenzoate-glycine-threonine trimeric ester bacillibactin

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

An improved algorithm for matching biological sequences.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

Hybrid genotypes in the pathogenic yeast Cryptococcus neoformans

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

Global VGIIa isolates are of comparable virulence to the major fatal Cryptococcus gattii Vancouver Island outbreak genotype

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

Same-sex mating and the origin of the Vancouver Island Cryptococcus gattii outbreak

9 December 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037005

Environmental isolation of Cryptococcus neoformans var. gattii from Eucalyptus tereticornis

9 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21304167

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Cryptococcal meningitis in patients with AIDS

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21304167

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Diploid strains of the pathogenic basidiomycete Cryptococcus neoformans are thermally dimorphic.

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21304167

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Biosynthesis of the Iron-Transport Compound Enterochelin: Mutants of Escherichia coli Unable to Synthesize 2,3-Dihydroxybenzoate

1 reference

12 April 2024

https://opencitations.net/index/api/v1/citations/10.1128/JB.106.1.51-57.1971

Identifiers

DOI

10.1128/MBIO.00342-10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21304167%20AND%20SRC:MED&resulttype=core&format=json

22 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21304167%20AND%20SRC:MED&resulttype=core&format=json

22 January 2020

PubMed publication ID

21304167

1 reference