Human non-CG methylation: are human stem cells plant-like? (Q34567688)

3 August 2017

1 reference

title

Human non-CG methylation: are human stem cells plant-like? (English)

1 reference

3 August 2017

Olga V Dyachenko

1

1 reference

3 August 2017

Tara V Schevchuk

2

1 reference

3 August 2017

Leo Kretzner

3

1 reference

3 August 2017

Yaroslav I Buryanov

4

1 reference

3 August 2017

Steven S Smith

5

1 reference

3 August 2017

publication date

1 October 2010

1 reference

3 August 2017

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3 August 2017

volume

5

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3 August 2017

issue

7

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3 August 2017

page(s)

569-572

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Human DNA methylomes at base resolution show widespread epigenomic differences

3 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

Cancer stem cells: mirage or reality?

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

Progressive accumulation of epigenetic heterogeneity during human ES cell culture

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

A "latent niche" mechanism for tumor initiation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

Transcriptional inhibiton of Hoxd4 expression by miRNA-10a in human breast cancer cells

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

Secondary structure at a hot spot for DNA methylation in DNA from human breast cancers.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

The MIRA method for DNA methylation analysis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

Location, location, location: the cancer stem cell niche

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

Short hairpin RNA causes the methylation of transforming growth factor-beta receptor II promoter and silencing of the target gene in rat hepatic stellate cells

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

Recovery of bisulfite-converted genomic sequences in the methylation-sensitive QPCR.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

Combination of methylated-DNA precipitation and methylation-sensitive restriction enzymes (COMPARE-MS) for the rapid, sensitive and quantitative detection of DNA methylation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

Transgene-induced CCWGG methylation does not alter CG methylation patterning in human kidney cells

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

Short double-stranded RNA induces transcriptional gene silencing in human cancer cells in the absence of DNA methylation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

Evidence for a triplex DNA conformation at the bcl-2 major breakpoint region of the t(14;18) translocation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

Small interfering RNA-induced transcriptional gene silencing in human cells

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

Lack of homologous sequence-specific DNA methylation in response to stable dsRNA expression in mouse oocytes.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

CmC(A/T)GG DNA methylation in mature B cell lymphoma gene silencing

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

DNA recognition by the methyl-CpG binding domain of MeCP2.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

Gilbert's conjecture: the search for DNA (cytosine-5) demethylases and the emergence of new functions for eukaryotic DNA (cytosine-5) methyltransferases

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

Non-CpG methylation is prevalent in embryonic stem cells and may be mediated by DNA methyltransferase 3a.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

Conserved plant genes with similarity to mammalian de novo DNA methyltransferases.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

DNA methylation in the promoter region of the p16 (CDKN2/MTS-1/INK4A) gene in human breast tumours

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

Stalling of human DNA (cytosine-5) methyltransferase at single-strand conformers from a site of dynamic mutation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

Asymmetric methylation in the hypermethylated CpG promoter region of the human L1 retrotransposon

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

Methylation-specific PCR: a novel PCR assay for methylation status of CpG islands

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

Densely methylated DNA islands in mammalian chromosomal replication origins

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

A mammalian origin of bidirectional DNA replication within the Chinese hamster RPS14 locus

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

Biological implications of the mechanism of action of human DNA (cytosine-5)methyltransferase

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

CpNpG methylation in mammalian cells

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

Asymmetrical distribution of CpG in an 'average' mammalian gene

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

DNA methylation and CpG suppression

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

The CpG dinucleotide and human genetic disease

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

Genomic sequencing and methylation analysis by ligation mediated PCR.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

Establishment of de novo DNA methylation patterns. Transcription factor binding and deoxycytidine methylation at CpG and non-CpG sequences in an integrated adenovirus promoter

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037444

Requirement of CHROMOMETHYLASE3 for maintenance of CpXpG methylation

7 July 2018

1 reference

https://api.crossref.org/works/10.4161%2FEPI.5.7.12702

Role of the DRM and CMT3 methyltransferases in RNA-directed DNA methylation.

21 January 2018

1 reference

https://api.crossref.org/works/10.4161%2FEPI.5.7.12702

Short hairpin RNA-directed cytosine (CpG) methylation of the RASSF1A gene promoter in HeLa cells

21 January 2018

1 reference

https://api.crossref.org/works/10.4161%2FEPI.5.7.12702

CpG deficiency, dinucleotide distributions and nucleosome positioning

21 January 2018

1 reference

https://api.crossref.org/works/10.4161%2FEPI.5.7.12702

Distribution of CWG and CCWGG in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.4161%2FEPI.5.7.12702

Stalling of human methyltransferase at single-strand conformers from the Huntington's locus

21 January 2018

1 reference

https://api.crossref.org/works/10.4161%2FEPI.5.7.12702

Methods for the design and analysis of oligodeoxynucleotide-based DNA (cytosine-5) methyltransferase inhibitors

21 January 2018

1 reference

https://api.crossref.org/works/10.4161%2FEPI.5.7.12702

Methylation-dependent fragment separation: direct detection of DNA methylation by capillary electrophoresis of PCR products from bisulfite-converted genomic DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.4161%2FEPI.5.7.12702

Erratum: Retraction: Induction of DNA methylation and gene silencing by short interfering RNAs in human cells

21 January 2018

1 reference

https://api.crossref.org/works/10.4161%2FEPI.5.7.12702

The majority of methylated deoxycytidines in human DNA are not in the CpG dinucleotide

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20647766

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

[The lack of the CpNpG methylation at the 5'-terminal region of the human calcitonin gene in norm and in leukemia []

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20647766

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Evidence that cytosine residues within 5'-CCTGG-3' pentanucleotides can be methylated in human DNA independently of the methylating system that modifies 5'-CG-3' dinucleotides

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20647766

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.4161/EPI.5.7.12702

1 reference

3 August 2017

1 reference

3 August 2017

1 reference