Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis (Q34569476)

3 August 2017

title

Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis (English)

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3 August 2017

main subject

Alcanivorax borkumensis

Alcanivorax borkumensis

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Manuel Ferrer

9

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Alexander Goesmann

11

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Folker Meyer

18

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20

Alfred Pühler

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Oliver Rupp

22

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24

Werner Selbitschka

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3 August 2017

Michail M Yakimov

25

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26

Kenneth N Timmis

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27

Frank-Jörg Vorhölter

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28

Stefan Weidner

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3 August 2017

Peter N Golyshin

30

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Alice Carolyn McHardy

17

Alice C McHardy

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3

Daniela Bartels

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Susanne Schneiker-Bekel

1

Susanne Schneiker

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4

Thomas Bekel

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3 August 2017

27

Frank-Jörg Vorhölter

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3 August 2017

16

Burkhard Linke

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Vitor Martins dos Santos

2

Vítor A P Martins dos Santos

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14

Amit N Khachane

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Martina Brecht

5

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Jens Buhrmester

6

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Tatyana N Chernikova

7

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Renata Denaro

8

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Christoph Gertler

10

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Olga V Golyshina

12

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Filip Kaminski

13

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Siegmund Lang

15

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Taras Nechitaylo

19

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Daniela Regenhardt

21

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Julia S Sabirova

23

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Werner Selbitschka

24

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Olaf Kaiser

29

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publication date

30 July 2006

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3 August 2017

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3 August 2017

volume

24

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3 August 2017

issue

8

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3 August 2017

page(s)

997-1004

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Evidence for in situ crude oil biodegradation after the Prestige oil spill

3 August 2017

cites work

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Alcanivorax borkumensis gen. nov., sp. nov., a new, hydrocarbon-degrading and surfactant-producing marine bacterium.

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Molecular detection of marine bacterial populations on beaches contaminated by the Nakhodka tanker oil-spill accident.

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Alcanivorax which prevails in oil-contaminated seawater exhibits broad substrate specificity for alkane degradation

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Natural microbial diversity in superficial sediments of Milazzo Harbor (Sicily) and community successions during microcosm enrichment with various hydrocarbons.

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Bacterial community dynamics and hydrocarbon degradation during a field-scale evaluation of bioremediation on a mudflat beach contaminated with buried oil.

21 January 2018

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Genome sequence completed of Alcanivorax borkumensis, a hydrocarbon-degrading bacterium that plays a global role in oil removal from marine systems.

21 January 2018

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Development of specific oligonucleotide probes for the identification and in situ detection of hydrocarbon-degrading Alcanivorax strains

21 January 2018

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Characterization of two alkane hydroxylase genes from the marine hydrocarbonoclastic bacterium Alcanivorax borkumensis

21 January 2018

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Novel glycine containing glucolipids from the alkane using bacterium Alcanivorax borkumensis

21 January 2018

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Cloning and functional analysis of alkB genes in Alcanivorax borkumensis SK2.

21 January 2018

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Analysis of Pseudomonas putida alkane-degradation gene clusters and flanking insertion sequences: evolution and regulation of the alk genes

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A complex signaling module governs the activity of MalT, the prototype of an emerging transactivator family

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Functional analysis of alkane hydroxylases from gram-negative and gram-positive bacteria

21 January 2018

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Identification of an amino acid position that determines the substrate range of integral membrane alkane hydroxylases

21 January 2018

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Environmental genome shotgun sequencing of the Sargasso Sea

21 January 2018

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Biodegradation of n-alkylcycloalkanes and n-alkylbenzenes via new pathways in Alcanivorax sp. strain MBIC 4326.

21 January 2018

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Proteomic insights into metabolic adaptations in Alcanivorax borkumensis induced by alkane utilization

21 January 2018

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The active component of the bioemulsifier alasan from Acinetobacter radioresistens KA53 is an OmpA-like protein

21 January 2018

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Natural roles of biosurfactants

21 January 2018

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Genome sequence of the deep-sea gamma-proteobacterium Idiomarina loihiensis reveals amino acid fermentation as a source of carbon and energy

21 January 2018

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Marine microorganisms make a meal of oil.

21 January 2018

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Cycloclasticus pugetii gen. nov., sp. nov., an aromatic hydrocarbon-degrading bacterium from marine sediments

21 January 2018

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Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors

21 January 2018

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Base-calling of automated sequencer traces using phred. I. Accuracy assessment

21 January 2018

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Base-calling of automated sequencer traces using phred. II. Error probabilities

21 January 2018

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Whole genome shotgun sequencing guided by bioinformatics pipelines--an optimized approach for an established technique

21 January 2018

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21 January 2018

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Automated finishing with autofinish

21 January 2018

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BACCardI--a tool for the validation of genomic assemblies, assisting genome finishing and intergenome comparison

21 January 2018

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Strategy to sequence the genome of Corynebacterium glutamicum ATCC 13032: use of a cosmid and a bacterial artificial chromosome library

21 January 2018

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GenDB--an open source genome annotation system for prokaryote genomes

21 January 2018

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Development of joint application strategies for two microbial gene finders

21 January 2018

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A probabilistic method for identifying start codons in bacterial genomes.

21 January 2018

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tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

21 January 2018

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The COG database: an updated version includes eukaryotes

21 January 2018

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The Gene Ontology (GO) database and informatics resource

21 January 2018

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 January 2018

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The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

21 January 2018

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WWW-query: an on-line retrieval system for biological sequence banks

21 January 2018

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MEGA2: molecular evolutionary genetics analysis software

21 January 2018

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Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen

21 January 2018

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Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440

21 January 2018

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The Pseudomonas oleovorans alkane hydroxylase gene. Sequence and expression

21 January 2018

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12 December 2020

Petroleum biodegradation in marine environments.

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12 December 2020

Molecular characterization of the 56-kDa CYP153 from Acinetobacter sp. EB104.

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12 December 2020

Isolation, characterization, and expression in Escherichia coli of the Pseudomonas aeruginosa rhlAB genes encoding a rhamnosyltransferase involved in rhamnolipid biosurfactant synthesis

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12 December 2020

WormBase: a multi-species resource for nematode biology and genomics

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7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1038/NBT1232

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3 August 2017

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