The small untranslated RNA SR1 from the Bacillus subtilis genome is involved in the regulation of arginine catabolism. (Q34571457)

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20 December 2019

title

The small untranslated RNA SR1 from the Bacillus subtilis genome is involved in the regulation of arginine catabolism (English)

1 reference

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20 December 2019

Bacillus subtilis

1 reference

1

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20 December 2019

author name string

Alberto Chinali

series ordinal

2

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20 December 2019

Ulf Gerth

series ordinal

3

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20 December 2019

Sabine Brantl

series ordinal

4

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20 December 2019

language of work or name

English

0 references

publication date

1 October 2006

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20 December 2019

published in

Molecular Microbiology

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20 December 2019

volume

62

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20 December 2019

issue

2

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20 December 2019

page(s)

520-536

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Both RNase E and RNase III control the stability of sodB mRNA upon translational inhibition by the small regulatory RNA RyhB.

20 December 2019

cites work

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

A small, stable RNA induced by oxidative stress: role as a pleiotropic regulator and antimutator.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

The Escherichia coli OxyS regulatory RNA represses fhlA translation by blocking ribosome binding

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

Novel small RNA-encoding genes in the intergenic regions of Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

6S RNA is a widespread regulator of eubacterial RNA polymerase that resembles an open promoter

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

RocR, a novel regulatory protein controlling arginine utilization in Bacillus subtilis, belongs to the NtrC/NifA family of transcriptional activators

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

A bioinformatics based approach to discover small RNA genes in the Escherichia coli genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

MicC, a second small-RNA regulator of Omp protein expression in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

MicF: an antisense RNA gene involved in response of Escherichia coli to global stress factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

A comprehensive proteome map of growing Bacillus subtilis cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

Differential expression of a Clostridium acetobutylicum antisense RNA: implications for regulation of glutamine synthetase

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

Antisense-RNA mediated transcriptional attenuation: importance of a U-turn loop structure in the target RNA of plasmid pIP501 for efficient inhibition by the antisense RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

Staphylococcus aureus RNAIII and the endoribonuclease III coordinately regulate spa gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

A binding site for activation by the Bacillus subtilis AhrC protein, a repressor/activator of arginine metabolism.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

A trans-acting RNA as a control switch in Escherichia coli: DsrA modulates function by forming alternative structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

RNA expression analysis using an antisense Bacillus subtilis genome array

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

The small RNA chaperone Hfq and multiple small RNAs control quorum sensing in Vibrio harveyi and Vibrio cholerae

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

Implication of CcpN in the regulation of a novel untranslated RNA (SR1) in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

DsrA RNA regulates translation of RpoS message by an anti-antisense mechanism, independent of its action as an antisilencer of transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

Regulation of RpoS by a novel small RNA: the characterization of RprA

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

Synthesis of group A streptococcal virulence factors is controlled by a regulatory RNA molecule.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

Incorporating chemical modification constraints into a dynamic programming algorithm for prediction of RNA secondary structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

Operator interactions by the Bacillus subtilis arginine repressor/activator, AhrC: novel positioning and DNA-mediated assembly of a transcriptional activator at catabolic sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

Spot 42 RNA mediates discoordinate expression of the E. coli galactose operon

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

Hfq: a bacterial Sm-like protein that mediates RNA-RNA interaction

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

Bacillus subtilis RNase III cleaves both 5'- and 3'-sites of the small cytoplasmic RNA precursor

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

GadY, a small-RNA regulator of acid response genes in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

Computational identification of noncoding RNAs in E. coli by comparative genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

DNA sequencing with chain-terminating inhibitors

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

Small untranslated RNA antitoxin in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

Hfq is necessary for regulation by the untranslated RNA DsrA

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

Transcription regulation in thermophilic bacteria: high resolution contact probing of Bacillus stearothermophilus and Thermotoga neapolitana arginine repressor-operator interactions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

Integrative vector for constructing single-copy translational fusions between regulatory regions of Bacillus subtilis and the bgaB reporter gene encoding a heat-stable beta-galactosidase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

Induction of the Bacillus subtilis ptsGHI operon by glucose is controlled by a novel antiterminator, GlcT.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

A highly conserved 6S RNA structure is required for regulation of transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

Hfq-dependent regulation of OmpA synthesis is mediated by an antisense RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

The gcvB gene encodes a small untranslated RNA involved in expression of the dipeptide and oligopeptide transport systems in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

Involvement of a novel transcriptional activator and small RNA in post-transcriptional regulation of the glucose phosphoenolpyruvate phosphotransferase system

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

RNomics in Escherichia coli detects new sRNA species and indicates parallel transcriptional output in bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

The small RNA IstR inhibits synthesis of an SOS-induced toxic peptide

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

Identification of novel small RNAs using comparative genomics and microarrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

The OxyS regulatory RNA represses rpoS translation and binds the Hfq (HF-I) protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

The Sm-like Hfq protein increases OxyS RNA interaction with target mRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X

Identification and characterization of novel small RNAs in the aspS-yrvM intergenic region of the Bacillus subtilis genome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05384.X