VIROME: a standard operating procedure for analysis of viral metagenome sequences. (Q34585327)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23407591%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

title

VIROME: a standard operating procedure for analysis of viral metagenome sequences (English)

1 reference

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23 February 2020

1 reference

3

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23 February 2020

author name string

K Eric Wommack

1

1 reference

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23 February 2020

Jaysheel Bhavsar

2

1 reference

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23 February 2020

Jing Chen

4

1 reference

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23 February 2020

Michael Dumas

5

1 reference

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23 February 2020

Sharath Srinivasiah

6

1 reference

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23 February 2020

Megan Furman

7

1 reference

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23 February 2020

Sanchita Jamindar

8

1 reference

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23 February 2020

Daniel J Nasko

9

1 reference

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23 February 2020

publication date

27 July 2012

1 reference

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Standards in genomic sciences

23 February 2020

published in

1 reference

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23 February 2020

volume

6

1 reference

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23 February 2020

issue

3

1 reference

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23 February 2020

page(s)

427-439

1 reference

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TheViral MetaGenome Annotation Pipeline(VMGAP):an automated tool for the functional annotation of viral Metagenomic shotgun sequencing data

23 February 2020

cites work

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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Viral and microbial community dynamics in four aquatic environments.

7 July 2018

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7 July 2018

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Photosystem I gene cassettes are present in marine virus genomes

7 July 2018

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Isolation independent methods of characterizing phage communities 2: characterizing a metagenome.

7 July 2018

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The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

7 July 2018

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MetaGeneAnnotator: detecting species-specific patterns of ribosomal binding site for precise gene prediction in anonymous prokaryotic and phage genomes

7 July 2018

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Phages across the biosphere: contrasts of viruses in soil and aquatic environments

7 July 2018

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Functional metagenomic profiling of nine biomes

7 July 2018

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Metagenomics: read length matters

7 July 2018

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7 July 2018

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Metagenomic characterization of Chesapeake Bay virioplankton

7 July 2018

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UniRef: comprehensive and non-redundant UniProt reference clusters

7 July 2018

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The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific

7 July 2018

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CAMERA: a community resource for metagenomics

7 July 2018

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The marine viromes of four oceanic regions

7 July 2018

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Community genomics among stratified microbial assemblages in the ocean's interior

7 July 2018

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The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes

7 July 2018

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7 July 2018

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Ecological significance of microdiversity: identical 16S rRNA gene sequences can be found in bacteria with highly divergent genomes and ecophysiologies

7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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21 January 2018

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21 January 2018

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PubMed

https://pubmed.ncbi.nlm.nih.gov/23407591

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.4056/SIGS.2945050

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23407591%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

23 February 2020

0 references

1 reference

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23 February 2020

PubMed publication ID

23407591

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23407591%20AND%20SRC:MED&resulttype=core&format=json