Alterations in the colonic microbiota in response to osmotic diarrhea (Q34586306)

3 August 2017

Alterations in the colonic microbiota in response to osmotic diarrhea (English)

1 reference

3 August 2017

0 references

1 reference

Gernot Stocker

5

0 references

Gregor Gorkiewicz

Gregor Gorkiewicz

1

0 references

Christoph Högenauer

Christoph Högenauer

8

0 references

Gerhard G Thallinger

Gerhard G Thallinger

2

0 references

author name string

Slave Trajanoski

3

1 reference

3 August 2017

Stefan Lackner

4

1 reference

3 August 2017

Thomas Hinterleitner

6

1 reference

3 August 2017

Christian Gülly

7

1 reference

3 August 2017

language of work or name

English

0 references

publication date

8 February 2013

1 reference

3 August 2017

1 reference

3 August 2017

8

1 reference

3 August 2017

2

1 reference

3 August 2017

e55817

1 reference

Creative Commons Attribution 4.0 International

3 August 2017

start time

8 February 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

Cytoscape

Cytoscape

2 references

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

edgeR

edgeR

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

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7 July 2018

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PCR biases distort bacterial and archaeal community structure in pyrosequencing datasets

7 July 2018

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Non-invasive mapping of the gastrointestinal microbiota identifies children with inflammatory bowel disease

7 July 2018

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Composition of the adult digestive tract bacterial microbiome based on seven mouth surfaces, tonsils, throat and stool samples

7 July 2018

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High-throughput sequencing of 16S rRNA gene amplicons: effects of extraction procedure, primer length and annealing temperature

7 July 2018

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Interaction between the intestinal microbiota and host in Clostridium difficile colonization resistance

7 July 2018

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Evaluation of methods for the extraction and purification of DNA from the human microbiome

7 July 2018

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Standard colonic lavage alters the natural state of mucosal-associated microbiota in the human colon

7 July 2018

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Amplification by PCR artificially reduces the proportion of the rare biosphere in microbial communities

7 July 2018

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Reducing the effects of PCR amplification and sequencing artifacts on 16S rRNA-based studies

7 July 2018

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Contribution of siderophore systems to growth and urinary tract colonization of asymptomatic bacteriuria Escherichia coli

7 July 2018

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Linking long-term dietary patterns with gut microbial enterotypes

7 July 2018

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UCHIME improves sensitivity and speed of chimera detection

7 July 2018

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Enterotypes of the human gut microbiome

7 July 2018

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Reproducibility and quantitation of amplicon sequencing-based detection

7 July 2018

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Removing noise from pyrosequenced amplicons

7 July 2018

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The effects from DNA extraction methods on the evaluation of microbial diversity associated with human colonic tissue

7 July 2018

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Host-bacterial symbiosis in health and disease

7 July 2018

1 reference

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Spatial organization of intestinal microbiota in the mouse ascending colon

7 July 2018

1 reference

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Effects of polymerase, template dilution and cycle number on PCR based 16 S rRNA diversity analysis using the deep sequencing method

7 July 2018

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Incomplete recovery and individualized responses of the human distal gut microbiota to repeated antibiotic perturbation

7 July 2018

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Enterobacteriaceae act in concert with the gut microbiota to induce spontaneous and maternally transmitted colitis

7 July 2018

1 reference

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Pseudomonas putida bacteremia in adult patients: five case reports and a review of the literature

7 July 2018

1 reference

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Comparative genomics and functional analysis of niche-specific adaptation in Pseudomonas putida.

7 July 2018

1 reference

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Assessing gut microbial diversity from feces and rectal mucosa

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3568139

The two mucus layers of colon are organized by the MUC2 mucin, whereas the outer layer is a legislator of host-microbial interactions

7 July 2018

1 reference

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Intestinal dysbiosis in irritable bowel syndrome: etiological factor or epiphenomenon?

7 July 2018

1 reference

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Comparative analysis of fecal DNA extraction methods with phylogenetic microarray: effective recovery of bacterial and archaeal DNA using mechanical cell lysis

7 July 2018

1 reference

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edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

7 July 2018

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Bacterial community variation in human body habitats across space and time

7 July 2018

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Accurate determination of microbial diversity from 454 pyrosequencing data

7 July 2018

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Postinfectious irritable bowel syndrome

7 July 2018

1 reference

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Statistical methods for detecting differentially abundant features in clinical metagenomic samples

7 July 2018

1 reference

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Commensal bacteria, traditional and opportunistic pathogens, dysbiosis and bacterial killing in inflammatory bowel diseases

7 July 2018

1 reference

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Infernal 1.0: inference of RNA alignments

7 July 2018

1 reference

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Monitoring disease activity by stool analyses: from occult blood to molecular markers of intestinal inflammation and damage

7 July 2018

1 reference

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The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

7 July 2018

1 reference

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Faecalibacterium prausnitzii is an anti-inflammatory commensal bacterium identified by gut microbiota analysis of Crohn disease patients

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3568139

Microbial biofilm communities in the gastrointestinal tract

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3568139

The species composition of the human intestinal microbiota differs between particle-associated and liquid phase communities

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3568139

Metagenomic approaches for defining the pathogenesis of inflammatory bowel diseases

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3568139

The macaque gut microbiome in health, lentiviral infection, and chronic enterocolitis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3568139

Decreased diversity of the fecal Microbiome in recurrent Clostridium difficile-associated diarrhea

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3568139

Host-mediated inflammation disrupts the intestinal microbiota and promotes the overgrowth of Enterobacteriaceae

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3568139

An ecological and evolutionary perspective on human-microbe mutualism and disease

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3568139

The human microbiome project

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3568139

Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3568139

Accuracy and quality of massively parallel DNA pyrosequencing

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3568139

Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3568139

Microbial biofilms in the human gastrointestinal tract

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3568139

Effect of bowel preparation and colonoscopy on post-procedure intestinal microbiota composition

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3568139

Spatial organization and composition of the mucosal flora in patients with inflammatory bowel disease

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3568139

Maintaining remission of ulcerative colitis with the probiotic Escherichia coli Nissle 1917 is as effective as with standard mesalazine

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3568139

Therapeutic manipulation of the enteric microflora in inflammatory bowel diseases: antibiotics, probiotics, and prebiotics

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3568139

Getting a grip on things: how do communities of bacterial symbionts become established in our intestine?

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3568139

Reduction in diversity of the colonic mucosa associated bacterial microflora in patients with active inflammatory bowel disease

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3568139

Antibiotic-associated diarrhea accompanied by large-scale alterations in the composition of the fecal microbiota

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3568139

Cytoscape: a software environment for integrated models of biomolecular interaction networks

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3568139

Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3568139

Biodiversity as a barrier to ecological invasion

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3568139

Stool form scale as a useful guide to intestinal transit time

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3568139

7 July 2018

1 reference

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Studies of osmotic diarrhea induced in normal subjects by ingestion of polyethylene glycol and lactulose

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3568139

The core gut microbiome, energy balance and obesity

7 July 2018

1 reference

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A molecular analysis of fecal and mucosal bacterial communities in irritable bowel syndrome.

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055817

Short pyrosequencing reads suffice for accurate microbial community analysis

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055817

Probiotic properties of Weissella strains isolated from human faeces.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055817

Characterization of dextran-producing Weissella strains isolated from sourdoughs and evidence of constitutive dextransucrase expression.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055817

Prospective, randomized, parallel-group trial to evaluate the effects of lactulose and polyethylene glycol-4000 on colonic flora in chronic idiopathic constipation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055817

Ecosystems and the Biosphere as Complex Adaptive Systems

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055817

Low counts of Faecalibacterium prausnitzii in colitis microbiota.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055817

A pyrosequencing study in twins shows that gastrointestinal microbial profiles vary with inflammatory bowel disease phenotypes

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055817

Clinical spectrum of Pseudomonas putida infection

21 January 2018

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12 December 2020

Rapid intestinal transit as a primary cause of severe chronic diarrhea in patients with amyloidosis

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12 December 2020

The effect of diarrhea on fecal fat excretion

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12 December 2020

Studies of the prevalence and significance of radiolabeled bile acid malabsorption in a group of patients with idiopathic chronic diarrhea

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0055817

Identifiers

DOI

1 reference

3 August 2017

0 references

1 reference

3 August 2017

1 reference