RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation. (Q34586477)

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English	RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation.	scientific article

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scholarly article

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31 December 2019

RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation (English)

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31 December 2019

Escherichia coli

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Martin Peralta-Gil

3

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31 December 2019

Alberto Santos-Zavaleta

4

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31 December 2019

Bruno Contreras-Moreira

6

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31 December 2019

Cei Abreu-Goodger

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31 December 2019

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31 December 2019

Julio Collado-Vides

19

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31 December 2019

César Bonavides-Martínez

11

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César Bonavides-Martínez

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31 December 2019

Socorro Gama-Castro

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Socorro Gama-Castro

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31 December 2019

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Verónica Jiménez-Jacinto

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31 December 2019

Mónica I Peñaloza-Spinola

5

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31 December 2019

Juan Segura-Salazar

7

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31 December 2019

Luis Muñiz-Rascado

8

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31 December 2019

Irma Martínez-Flores

9

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31 December 2019

Heladia Salgado

10

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31 December 2019

Juan Miranda-Ríos

14

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31 December 2019

Araceli M Huerta

17

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31 December 2019

Luis Treviño-Quintanilla

18

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31 December 2019

Carlos Rodríguez-Penagos

13

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31 December 2019

language of work or name

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publication date

23 December 2007

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31 December 2019

Nucleic Acids Research

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31 December 2019

36

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31 December 2019

Database issue

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D120-4

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31 December 2019

Automatic reconstruction of a bacterial regulatory network using Natural Language Processing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238961

7 July 2018

RegulonDB (version 5.0): Escherichia coli K-12 transcriptional regulatory network, operon organization, and growth conditions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238961

7 July 2018

EcoCyc: a comprehensive database resource for Escherichia coli

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7 July 2018

Integr8 and Genome Reviews: integrated views of complete genomes and proteomes

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7 July 2018

Rfam: annotating non-coding RNAs in complete genomes

1 reference

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7 July 2018

Textpresso: an ontology-based information retrieval and extraction system for biological literature

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238961

7 July 2018

The riboswitch control of bacterial metabolism

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238961

7 July 2018

Regulatory network of Escherichia coli: consistency between literature knowledge and microarray profiles.

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7 July 2018

Gene ontology: tool for the unification of biology

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238961

7 July 2018

Revolutions in rapid amplification of cDNA ends: new strategies for polymerase chain reaction cloning of full-length cDNA ends

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7 July 2018

Attenuation in the control of expression of bacterial operons

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7 July 2018

Translational attenuation: the regulation of bacterial resistance to the macrolide-lincosamide-streptogramin B antibiotics.

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7 July 2018

Translational attenuation as the regulator of inducible cat genes

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238961

7 July 2018

Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals.

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21 January 2018

Internal-sensing machinery directs the activity of the regulatory network in Escherichia coli.

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GeConT: gene context analysis.

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Transcription attenuation: a highly conserved regulatory strategy used by bacteria

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/GKM994

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Europe PubMed Central

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31 December 2019

DBLP publication ID

journals/nar/Gama-CastroJPSPCSMMSBAPMMMHTC08

1 reference

DBLP Dataset 2021-01-02

28 January 2021

release_urvakflembbkdajpzep5jxiph4

1 reference

https://api.fatcat.wiki/v0/release/urvakflembbkdajpzep5jxiph4

24 November 2022

based on heuristic

mapped directly with Wikidata item

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31 December 2019

1 reference

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31 December 2019

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