Cryptic failure of partitioned Bayesian phylogenetic analyses: lost in the land of long trees (Q34620233)

3 August 2017

Cryptic failure of partitioned Bayesian phylogenetic analyses: lost in the land of long trees (English)

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3 August 2017

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David C Marshall

1

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3 August 2017

17 November 2009

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3 August 2017

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3 August 2017

59

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3 August 2017

108-117

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3 August 2017

1

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Relationships among pest flour beetles of the genus Tribolium (Tenebrionidae) inferred from multiple molecular markers

3 August 2017

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP080

Partitioned Bayesian analyses, partition choice, and the phylogenetic relationships of scincid lizards

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP080

When trees grow too long: investigating the causes of highly inaccurate bayesian branch-length estimates.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP080

The importance of data partitioning and the utility of Bayes factors in Bayesian phylogenetics.

21 January 2018

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https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP080

Inference from Iterative Simulation Using Multiple Sequences

21 January 2018

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https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP080

Evaluating connectivity in the brooding brittle star Astrotoma agassizii across the drake passage in the Southern Ocean

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP080

Phylogeny, divergence times and species limits of spiny lizards (Sceloporus magister species group) in western North American deserts and Baja California

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP080

How do insect nuclear and mitochondrial gene substitution patterns differ? Insights from Bayesian analyses of combined datasets.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP080

Mitochondrial phylogeography of Rana (Pelophylax) populations in the Eastern Mediterranean region.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP080

Accurate branch length estimation in partitioned Bayesian analyses requires accommodation of among-partition rate variation and attention to branch length priors.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP080

Steady Plio-Pleistocene diversification and a 2-million-year sympatry threshold in a New Zealand cicada radiation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP080

Mitochondrial introgression and incomplete lineage sorting through space and time: phylogenetics of crotaphytid lizards.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP080

The phylogenetic position of toadfishes (order Batrachoidiformes) in the higher ray-finned fish as inferred from partitioned Bayesian analysis of 102 whole mitochondrial genome sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP080

Bayesian phylogenetic analysis of combined data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP080

A mitogenomic timescale for birds detects variable phylogenetic rates of molecular evolution and refutes the standard molecular clock

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP080

MODELTEST: testing the model of DNA substitution

21 January 2018

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https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP080

MrBayes 3: Bayesian phylogenetic inference under mixed models

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP080

A 567‐Taxon Data Set for Angiosperms: The Challenges Posed by Bayesian Analyses of Large Data Sets

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP080

Model Selection in Phylogenetics

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP080

Widespread polyphyly among Alopiinae snail genera: when phylogeny mirrors biogeography more closely than morphology.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP080

Detecting the node-density artifact in phylogeny reconstruction

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP080

Molecular phylogenies link rates of evolution and speciation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP080

Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods

21 January 2018

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https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP080

Branch-length prior influences Bayesian posterior probability of phylogeny.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP080

21 January 2018

Identifiers

DOI

10.1093/SYSBIO/SYP080

1 reference

3 August 2017

1 reference

PubMed ID

20525623