Chemical shift assignments for F-plasmid TraI (381-569). (Q34672729)

3 August 2017

title

Chemical shift assignments for F-plasmid TraI (381-569). (English)

1 reference

3 August 2017

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Nathan T Wright

1

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3 August 2017

Ananya Majumdar

series ordinal

2

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3 August 2017

Joel F Schildbach

series ordinal

3

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3 August 2017

publication date

10 October 2010

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Biomolecular NMR Assignments

3 August 2017

published in

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3 August 2017

volume

5

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3 August 2017

issue

1

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3 August 2017

page(s)

67-70

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Single-stranded DNA binding by F TraI relaxase and helicase domains is coordinately regulated

3 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057352

TALOS+: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057352

The diversity of conjugative relaxases and its application in plasmid classification

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057352

What antimicrobial resistance has taught us about horizontal gene transfer

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057352

A Novel Fold in the TraI Relaxase–Helicase C-Terminal Domain Is Essential for Conjugative DNA Transfer

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057352

Inter- and intramolecular determinants of the specificity of single-stranded DNA binding and cleavage by the F factor relaxase.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057352

The three-dimensional solution structure of Ca(2+)-bound S100A1 as determined by NMR spectroscopy

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057352

Mars -- robust automatic backbone assignment of proteins

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057352

Structural Insights into Single-Stranded DNA Binding and Cleavage by F Factor TraI

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057352

DNA recognition by F factor TraI36: highly sequence-specific binding of single-stranded DNA.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057352

The primase of broad-host-range plasmid R1162 is active in conjugal transfer

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057352

Functional domains in protein TrwC of plasmid R388: dissected DNA strand transferase and DNA helicase activities reconstitute protein function.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057352

NMRPipe: a multidimensional spectral processing system based on UNIX pipes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057352

Characterization of the reaction product of the oriT nicking reaction catalyzed by Escherichia coli DNA helicase I.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057352

Relaxase (TraI) of IncP alpha plasmid RP4 catalyzes a site-specific cleaving-joining reaction of single-stranded DNA.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057352

Covalent association of the traI gene product of plasmid RP4 with the 5'-terminal nucleotide at the relaxation nick site.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057352

Site- and strand-specific nicking in vitro at oriT by the traY-traI endonuclease of plasmid R100.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057352

Roles of active site residues and the HUH motif of the F plasmid TraI relaxase

7 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1007%2FS12104-010-9269-Y

Nicking activity of TrwC directed against the origin of transfer of the IncW plasmid R388.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1007%2FS12104-010-9269-Y

Subdomain organization and catalytic residues of the F factor TraI relaxase domain

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057352

Evidence that DNA helicase I and oriT site-specific nicking are both functions of the F TraI protein

9 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20936510

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Escherichia coli DNA helicase I catalyzes a sequence-specific cleavage/ligation reaction at the F plasmid origin of transfer

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20936510

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Site- and strand-specific nicking at oriT of plasmid R100 in a purified system: enhancement of the nicking activity of TraI (helicase I) with TraY and IHF

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20936510

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1007/S12104-010-9269-Y

1 reference

Dimensions Publication ID

3 August 2017

0 references

1 reference

3 August 2017

1 reference