Side-chain conformational entropy in protein folding (Q34732367)

4 August 2017

1 reference

title

Side-chain conformational entropy in protein folding (English)

1 reference

4 August 2017

0 references

Doig AJ

1

1 reference

PubMed ID

8563620

4 August 2017

Sternberg MJ

series ordinal

2

1 reference

4 August 2017

1 November 1995

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4 August 2017

1 reference

4 August 2017

4

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4 August 2017

2247-2251

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4 August 2017

11

1 reference

Empirical scale of side-chain conformational entropy in protein folding

4 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143028

Contribution of hydration to protein folding thermodynamics. II. The entropy and Gibbs energy of hydration

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143028

Biased probability Monte Carlo conformational searches and electrostatic calculations for peptides and proteins

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143028

Determination of alpha-helix propensity within the context of a folded protein. Sites 44 and 131 in bacteriophage T4 lysozyme

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143028

Application of a self-consistent mean field theory to predict protein side-chains conformation and estimate their conformational entropy

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143028

Protein side-chain conformational entropy derived from fusion data--comparison with other empirical scales

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143028

Detailed ab initio prediction of lysozyme-antibody complex with 1.6 A accuracy.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143028

A continuum model for protein-protein interactions: application to the docking problem.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143028

Hydrophobicity scales and computational techniques for detecting amphipathic structures in proteins

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143028

Configurational entropy of native proteins

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143028

Theory of cooperative transitions in protein molecules. I. Why denaturation of globular protein is a first-order phase transition

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143028

On the attribution of binding energy in antigen-antibody complexes McPC 603, D1.3, and HyHEL-5.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143028

A new approach to the rapid determination of protein side chain conformations

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143028

Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143028

Side-chain entropy opposes alpha-helix formation but rationalizes experimentally determined helix-forming propensities

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143028

Areas, volumes, packing and protein structure

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143028

Molecular basis of cooperativity in protein folding. IV. CORE: a general cooperative folding model.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143028

Affinity and specificity of serine endopeptidase-protein inhibitor interactions. Empirical free energy calculations based on X-ray crystallographic structures.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143028

Decomposition of the Free Energy of a System in Terms of Specific Interactions

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143028

Analysis and classification of disulphide connectivity in proteins. The entropic effect of cross-linkage

26 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/8563620

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Alpha-helix-forming propensities in peptides and proteins

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/8563620

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Is the hydrophobic effect stabilizing or destabilizing in proteins?

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/8563620

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1002/PRO.5560041101

1 reference

4 August 2017

1 reference

4 August 2017

1 reference

PubMed ID

8563620