Promoters of Escherichia coli versus promoter islands: function and structure comparison (Q34743860)

4 August 2017

title

Promoters of Escherichia coli versus promoter islands: function and structure comparison (English)

1 reference

4 August 2017

1 reference

Valeriy V Panyukov

1

1 reference

4 August 2017

Olga N Ozoline

series ordinal

2

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4 August 2017

language of work or name

English

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publication date

22 May 2013

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4 August 2017

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4 August 2017

volume

8

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4 August 2017

issue

5

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4 August 2017

page(s)

e62601

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Creative Commons Attribution 4.0 International

4 August 2017

copyright license

start time

22 May 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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7 July 2018

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7 July 2018

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7 July 2018

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Expression and assembly of a functional type IV secretion system elicit extracytoplasmic and cytoplasmic stress responses in Escherichia coli

7 July 2018

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H-NS mediates the silencing of laterally acquired genes in bacteria

7 July 2018

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Regulon and promoter analysis of the E. coli heat-shock factor, sigma32, reveals a multifaceted cellular response to heat stress

7 July 2018

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RNA polymerase holoenzymes can share a single transcription start site for the Pm promoter. Critical nucleotides in the -7 to -18 region are needed to select between RNA polymerase with sigma38 or sigma32.

7 July 2018

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7 July 2018

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7 July 2018

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RNA editing enzyme APOBEC1 and some of its homologs can act as DNA mutators

7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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Functional modulation of Escherichia coli RNA polymerase

7 July 2018

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Competition among seven Escherichia coli sigma subunits: relative binding affinities to the core RNA polymerase

7 July 2018

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7 July 2018

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7 July 2018

1 reference

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7 July 2018

1 reference

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7 July 2018

1 reference

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7 July 2018

1 reference

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Molecular archaeology of the Escherichia coli genome

7 July 2018

1 reference

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Escherichia coli cytidine deaminase provides a molecular model for ApoB RNA editing and a mechanism for RNA substrate recognition

7 July 2018

1 reference

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Non-canonical sequence elements in the promoter structure. Cluster analysis of promoters recognized by Escherichia coli RNA polymerase

7 July 2018

1 reference

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Base-base and deoxyribose-base stacking interactions in B-DNA and Z-DNA: a quantum-chemical study

7 July 2018

1 reference

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Escherichia coli promoter sequences: analysis and prediction

7 July 2018

1 reference

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Regulation of the Escherichia coli uvrD gene in vivo

7 July 2018

1 reference

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dnaA protein regulates transcriptions of the rpoH gene of Escherichia coli.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3661553

Competing promoters in prokaryotic transcription

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3661553

Extensive functional overlap between sigma factors in Escherichia coli.

7 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0062601

A sigma54-dependent promoter in the regulatory region of the Escherichia coli rpoH gene.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0062601

The P1 promoter of the Escherichia coli rpoH gene is utilized by sigma 70 -RNAP or sigma s -RNAP depending on growth phase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0062601

Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0062601

Intragenic promotor-like sites in the genome of Escherichia coli discovery and functional implication.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0062601

The transition between transcriptional initiation and elongation in E. coli is highly variable and often rate limiting.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0062601

Virtual Footprint and PRODORIC: an integrative framework for regulon prediction in prokaryotes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0062601

H-NS, the genome sentinel.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0062601

[Antisense transcription within the hns locus of Escherichia coli]

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3661553

[Specificiety of DNA-protein interactions within transcription complexes of Escherichia coli]

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3661553

Positional Conservation of Clusters of Overlapping Promoter-Like Sequences in Enterobacterial Genomes

26 October 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0062601

Characterization of the Escherichia coli sigma E regulon

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23717391

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Promoter recognition and discrimination by EsigmaS RNA polymerase

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23717391

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0062601

1 reference

4 August 2017

0 references

1 reference

4 August 2017

1 reference