Use of optical mapping to sort uropathogenic Escherichia coli strains into distinct subgroups (Q34746981)

4 August 2017

title

Use of optical mapping to sort uropathogenic Escherichia coli strains into distinct subgroups (English)

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4 August 2017

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William R Schwan

1

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4 August 2017

Adam Briska

2

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4 August 2017

Buffy Stahl

3

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4 August 2017

Trevor K Wagner

4

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4 August 2017

Emily Zentz

5

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4 August 2017

John Henkhaus

6

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4 August 2017

Steven D Lovrich

7

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4 August 2017

William A Agger

8

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4 August 2017

Steven M Callister

9

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4 August 2017

Brian DuChateau

10

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4 August 2017

Colin W Dykes

11

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4 August 2017

publication date

8 April 2010

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4 August 2017

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4 August 2017

volume

156

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4 August 2017

issue

Pt 7

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4 August 2017

page(s)

2124-2135

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Genomic islands of uropathogenic Escherichia coli contribute to virulence

4 August 2017

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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Escherichia coli mediated urinary tract infections: are there distinct uropathogenic E. coli (UPEC) pathotypes?

7 July 2018

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Multiple insertional events, restricted by the genetic background, have led to acquisition of pathogenicity island IIJ96-like domains among Escherichia coli strains of different clinical origins

7 July 2018

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Single-molecule approach to bacterial genomic comparisons via optical mapping

7 July 2018

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Development and validation of a diagnostic DNA microarray to detect quinolone-resistant Escherichia coli among clinical isolates

7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli.

7 July 2018

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Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157

7 July 2018

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Epidemiology of urinary tract infections: incidence, morbidity, and economic costs

7 July 2018

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Impact of integrons and transposons on the evolution of resistance and virulence.

7 July 2018

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Phylogenetic analysis and prevalence of urosepsis strains of Escherichia coli bearing pathogenicity island-like domains

7 July 2018

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High frequency of mutator strains among human uropathogenic Escherichia coli isolates.

7 July 2018

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Automated ribotyping provides rapid phylogenetic subgroup affiliation of clinical extraintestinal pathogenic Escherichia coli strains

7 July 2018

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7 July 2018

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Establishment of a persistent Escherichia coli reservoir during the acute phase of a bladder infection.

7 July 2018

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Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12.

7 July 2018

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Genome sequence of enterohaemorrhagic Escherichia coli O157:H7

7 July 2018

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Rapid and simple determination of the Escherichia coli phylogenetic group

7 July 2018

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Multiple independent origins of Shigella clones of Escherichia coli and convergent evolution of many of their characteristics

7 July 2018

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Molecular epidemiologic approaches to urinary tract infection gene discovery in uropathogenic Escherichia coli

7 July 2018

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The link between phylogeny and virulence in Escherichia coli extraintestinal infection

7 July 2018

1 reference

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Diarrheagenic Escherichia coli

7 July 2018

1 reference

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Diagnosis and treatment of uncomplicated urinary tract infection

7 July 2018

1 reference

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Evolutionary relationships among pathogenic and nonpathogenic Escherichia coli strains inferred from multilocus enzyme electrophoresis and mdh sequence studies

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3068680

Pathogenicity islands of virulent bacteria: structure, function and impact on microbial evolution

7 July 2018

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A novel multiply primed polymerase chain reaction assay for identification of variant papG genes encoding the Gal(alpha 1-4)Gal-binding PapG adhesins of Escherichia coli

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3068680

Urinary tract infections in females.

7 July 2018

1 reference

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Excision of large DNA regions termed pathogenicity islands from tRNA-specific loci in the chromosome of an Escherichia coli wild-type pathogen.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3068680

Standard reference strains of Escherichia coli from natural populations

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3068680

Spontaneous deletions and flanking regions of the chromosomally inherited hemolysin determinant of an Escherichia coli O6 strain

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3068680

Algorithms for restriction map comparisons.

7 July 2018

1 reference

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Relationship of type 1 pilus expression in Escherichia coli to ascending urinary tract infections in mice.

7 July 2018

1 reference

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Regulation of production of type 1 pili among urinary tract isolates of Escherichia coli

7 July 2018

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Pyelonephritogenic Escherichia coli and killing of cultured human renal proximal tubular epithelial cells: role of hemolysin in some strains

7 July 2018

1 reference

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Deletions of chromosomal regions coding for fimbriae and hemolysins occur in vitro and in vivo in various extraintestinal Escherichia coli isolates

7 July 2018

1 reference

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An O (N2 log N) restriction map comparison and search algorithm

7 July 2018

1 reference

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Phylogenetic background and virulence genotype of ciprofloxacin-susceptible and ciprofloxacin-resistant Escherichia coli strains of human and avian origin.

7 July 2018

1 reference

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Optical mapping and 454 sequencing of Escherichia coli O157 : H7 isolates linked to the US 2006 spinach-associated outbreak.

26 October 2018

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Genotyping DNA chip for the simultaneous assessment of antibiotic resistance and pathogenic potential of extraintestinal pathogenic Escherichia coli

26 October 2018

1 reference

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Optical maps distinguish individual strains of Escherichia coli O157 : H7.

26 October 2018

1 reference

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Pathogenicity island markers in commensal and uropathogenic Escherichia coli isolates.

26 October 2018

1 reference

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Subtyping of uropathogenic Escherichia coli according to the pathogenicity island encoding uropathogenic-specific protein: comparison with phylogenetic groups.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3068680

High prevalence of multidrug resistance and random distribution of mobile genetic elements among uropathogenic Escherichia coli (UPEC) of the four major phylogenetic groups.

26 October 2018

1 reference

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Subtractive hybridization and optical mapping of the enterotoxigenic Escherichia coli H10407 chromosome: isolation of unique sequences and demonstration of significant similarity to the chromosome of E. coli K-12.

26 October 2018

1 reference

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Urinary tract infection: self-reported incidence and associated costs.

26 October 2018

1 reference

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Extended virulence genotypes of Escherichia coli strains from patients with urosepsis in relation to phylogeny and host compromise.

26 October 2018

1 reference

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Detection of urovirulence factors in Escherichia coli by multiplex polymerase chain reaction.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3068680

Clonal divergence in Escherichia coli as a result of recombination, not mutation

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3068680

Virulence Characteristics of Escherichia coli Causing First Urinary Tract Infection Predict Risk of Second Infection

26 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20378655

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Decreased predominance of papG class II allele in Escherichia coli strains isolated from adults with acute pyelonephritis and urinary tract abnormalities

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20378655

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1099/MIC.0.033977-0

1 reference

4 August 2017

1 reference

4 August 2017

1 reference