RNA2D3D: a program for generating, viewing, and comparing 3-dimensional models of RNA (Q34768823)

4 August 2017

title

RNA2D3D: a program for generating, viewing, and comparing 3-dimensional models of RNA (English)

1 reference

4 August 2017

Hugo M Martinez

1

1 reference

4 August 2017

Jacob V Maizel

series ordinal

2

1 reference

4 August 2017

Bruce A Shapiro

series ordinal

3

1 reference

4 August 2017

publication date

1 June 2008

1 reference

Journal of Biomolecular Structure and Dynamics

4 August 2017

published in

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4 August 2017

volume

25

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4 August 2017

issue

6

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4 August 2017

page(s)

669-683

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Automated de novo prediction of native-like RNA tertiary structures

4 August 2017

cites work

1 reference

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Bridging the gap in RNA structure prediction.

7 July 2018

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Structure of the ribosome-bound cricket paralysis virus IRES RNA.

7 July 2018

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The role of a metastable RNA secondary structure in hepatitis delta virus genotype III RNA editing

7 July 2018

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Graphical exploratory data analysis of RNA secondary structure dynamics predicted by the massively parallel genetic algorithm

7 July 2018

1 reference

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Prediction of RNA secondary structure by free energy minimization

7 July 2018

1 reference

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The prediction of the wild-type telomerase RNA pseudoknot structure and the pivotal role of the bulge in its formation

7 July 2018

1 reference

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RNA structure: reading the ribosome

7 July 2018

1 reference

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Comparative 3-D modeling of tmRNA

7 July 2018

1 reference

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Building programmable jigsaw puzzles with RNA.

7 July 2018

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7 July 2018

Analysis of RNA motifs

1 reference

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Structure of the 30S ribosomal subunit

7 July 2018

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The complete atomic structure of the large ribosomal subunit at 2.4 A resolution

7 July 2018

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MANIP: an interactive tool for modelling RNA.

7 July 2018

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An annealing mutation operator in the genetic algorithms for RNA folding

7 July 2018

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The crystal structure of an all-RNA hammerhead ribozyme: a proposed mechanism for RNA catalytic cleavage

7 July 2018

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On finding all suboptimal foldings of an RNA molecule

7 July 2018

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Predicting the three-dimensional folding of transfer RNA with a computer modeling protocol

7 July 2018

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Computer modeling 16 S ribosomal RNA.

7 July 2018

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The combination of symbolic and numerical computation for three-dimensional modeling of RNA.

7 July 2018

1 reference

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Modeling the three-dimensional structure of RNA using discrete nucleotide conformational sets.

7 July 2018

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Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes: the IRES functions as an RNA-based translation factor.

21 January 2018

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The massively parallel genetic algorithm for RNA folding: MIMD implementation and population variation

21 January 2018

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STRUCTURELAB: a heterogeneous bioinformatics system for RNA structure analysis.

21 January 2018

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Stem Trace: an interactive visual tool for comparative RNA structure analysis

21 January 2018

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Predicting RNA H-type pseudoknots with the massively parallel genetic algorithm

21 January 2018

1 reference

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RNA folding pathway functional intermediates: their prediction and analysis

26 October 2018

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12 December 2020

Molecular modeling and dynamics studies of HIV-1 kissing loop structures

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12 December 2020

The impact of dyskeratosis congenita mutations on the structure and dynamics of the human telomerase RNA pseudoknot domain

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12 December 2020

Molecular dynamics investigations of hammerhead ribozyme RNA

1 reference

12 December 2020

10.1080/07391102.2008.10531240

Identifiers

DOI

1 reference

4 August 2017

1 reference

4 August 2017

1 reference