Mechanisms of interactions of the nucleotide cofactor with the RepA protein of plasmid RSF1010. Binding dynamics studied using the fluorescence stopped-flow method (Q34769263)

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English	Mechanisms of interactions of the nucleotide cofactor with the RepA protein of plasmid RSF1010. Binding dynamics studied using the fluorescence stopped-flow method	scientific article

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7 February 2020

Mechanisms of interactions of the nucleotide cofactor with the RepA protein of plasmid RSF1010. Binding dynamics studied using the fluorescence stopped-flow method (English)

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7 February 2020

Anasuya Roychowdhury

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7 February 2020

Michal R Szymanski

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7 February 2020

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Iraida E Andreeva

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7 February 2020

Maria J Jezewska

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7 February 2020

Wlodzimierz Bujalowski

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7 February 2020

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1 November 2009

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7 February 2020

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7 February 2020

48

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7 February 2020

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7 February 2020

10620-10636

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7 February 2020

Dynamics of the ssDNA recognition by the RepA hexameric helicase of plasmid RSF1010: analyses using fluorescence stopped-flow intensity and anisotropy methods.

1 reference

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7 July 2018

On helicases and other motor proteins

1 reference

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7 July 2018

Multiple global conformational states of the hexameric RepA helicase of plasmid RSF1010 with different ssDNA-binding capabilities are induced by different numbers of bound nucleotides. Analytical ultracentrifugation and dynamic light scattering stud

1 reference

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7 July 2018

Structure of the tertiary complex of the RepA hexameric helicase of plasmid RSF1010 with the ssDNA and nucleotide cofactors in solution

1 reference

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7 July 2018

Non-replicative helicases at the replication fork

1 reference

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7 July 2018

Thermodynamic and kinetic methods of analyses of protein-nucleic acid interactions. From simpler to more complex systems

1 reference

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7 July 2018

Interactions of the RepA helicase hexamer of plasmid RSF1010 with the ssDNA. Quantitative analysis of stoichiometries, intrinsic affinities, cooperativities, and heterogeneity of the total ssDNA-binding site

1 reference

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7 July 2018

Helicase mechanisms and the coupling of helicases within macromolecular machines. Part II: Integration of helicases into cellular processes

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Helicase mechanisms and the coupling of helicases within macromolecular machines. Part I: Structures and properties of isolated helicases

1 reference

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7 July 2018

Kinetics of the E. coli replication factor DnaC protein-nucleotide interactions. II. Fluorescence anisotropy and transient, dynamic quenching stopped-flow studies of the reaction intermediates

1 reference

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7 July 2018

Crystal structure of the hexameric replicative helicase RepA of plasmid RSF1010

1 reference

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7 July 2018

Kinetic mechanism of nucleotide cofactor binding to Escherichia coli replicative helicase DnaB protein. stopped-flow kinetic studies using fluorescent, ribose-, and base-modified nucleotide analogues

1 reference

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7 July 2018

Kinetic mechanism of the single-stranded DNA recognition by Escherichia coli replicative helicase DnaB protein. Application of the matrix projection operator technique to analyze stopped-flow kinetics

1 reference

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7 July 2018

Functional and structural heterogeneity of the DNA binding site of the Escherichia coli primary replicative helicase DnaB protein

1 reference

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7 July 2018

The RepA protein of plasmid RSF1010 is a replicative DNA helicase.

1 reference

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7 July 2018

Mechanisms of helicase-catalyzed DNA unwinding

1 reference

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7 July 2018

Binding of Escherichia coli primary replicative helicase DnaB protein to single-stranded DNA. Long-range allosteric conformational changes within the protein hexamer

1 reference

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Bacteriophage T7 helicase/primase proteins form rings around single-stranded DNA that suggest a general structure for hexameric helicases

1 reference

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Spectroscopic Determination of Tryptophan and Tyrosine in Proteins*

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Molecular Nature of Two Nonconjugative Plasmids Carrying Drug Resistance Genes

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Calculation of protein extinction coefficients from amino acid sequence data

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Replication of the nonconjugative plasmid RSF1010 in Escherichia coli K-12

1 reference

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Allosteric interactions between the nucleotide-binding sites and the ssDNA-binding site in the PriA helicase-ssDNA complex. 3.

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Kinetic mechanisms of the nucleotide cofactor binding to the strong and weak nucleotide-binding site of the Escherichia coli PriA helicase. 2.

1 reference

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The Escherichia coli PriA helicase has two nucleotide-binding sites differing dramatically in their affinities for nucleotide cofactors. 1. Intrinsic affinities, cooperativities, and base specificity of nucleotide cofactor binding.

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1 reference

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Binding of six nucleotide cofactors to the hexameric helicase RepA protein of plasmid RSF1010. 2. Base specificity, nucleotide structure, magnesium, and salt effect on the cooperative binding of the cofactors

1 reference

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26 October 2018

Binding of six nucleotide cofactors to the hexameric helicase RepA protein of plasmid RSF1010. 1. Direct evidence of cooperative interactions between the nucleotide-binding sites of a hexameric helicase.

1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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12 December 2020

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Interactions of nucleotide cofactors with the Escherichia coli replication factor DnaC protein

1 reference

https://pubmed.ncbi.nlm.nih.gov/19747005

12 December 2020

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Multiple-step kinetic mechanism of DNA-independent ATP binding and hydrolysis by Escherichia coli replicative helicase DnaB protein: quantitative analysis using the rapid quench-flow method

1 reference

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Dynamics of gapped DNA recognition by human polymerase beta

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Helicase action of dnaB protein during replication from the Escherichia coli chromosomal origin in vitro

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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10.1021/BI900940Q

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7 February 2020

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7 February 2020

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7 February 2020

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