Single cell analysis of lymph node tissue from HIV-1 infected patients reveals that the majority of CD4+ T-cells contain one HIV-1 DNA molecule (Q34789289)

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English	Single cell analysis of lymph node tissue from HIV-1 infected patients reveals that the majority of CD4+ T-cells contain one HIV-1 DNA molecule	scientific article

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scholarly article

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Europe PubMed Central

PubMed publication ID

4 August 2017

Single cell analysis of lymph node tissue from HIV-1 infected patients reveals that the majority of CD4+ T-cells contain one HIV-1 DNA molecule (English)

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Europe PubMed Central

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4 August 2017

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Philippe Lemey

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Nuno Rodrigues Faria

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Nuno R Faria

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Mary Kearney

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Frank Maldarelli

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Frank Maldarelli

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4 August 2017

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John M Coffin

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4 August 2017

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John Mellors

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4 August 2017

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Sarah Palmer

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4 August 2017

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Wei Shao

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4 August 2017

David R. Ambrozak

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David Ambrozak

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4 August 2017

author name string

Lina Josefsson

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4 August 2017

Joseph Casazza

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4 August 2017

Shyamasundaran Kottilil

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4 August 2017

Michael Sneller

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4 August 2017

publication date

20 June 2013

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4 August 2017

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4 August 2017

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4 August 2017

6

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4 August 2017

e1003432

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Europe PubMed Central

PubMed publication ID

4 August 2017

copyright license

Creative Commons CC0 License

20 June 2013

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April 2022 Public Data File from Crossref

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copyrighted, dedicated to the public domain by copyright holder

0 references

Quantification of unintegrated HIV-1 DNA at the single cell level in vivo

1 reference

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8 July 2018

Prediction of blood volume in normal human adults.

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8 July 2018

Cell-to-cell spread of HIV permits ongoing replication despite antiretroviral therapy

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3688524

8 July 2018

Majority of CD4+ T cells from peripheral blood of HIV-1-infected individuals contain only one HIV DNA molecule

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3688524

8 July 2018

Estimate of effective recombination rate and average selection coefficient for HIV in chronic infection

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8 July 2018

New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0

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8 July 2018

Recombination rate and selection strength in HIV intra-patient evolution

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8 July 2018

HIV reservoir size and persistence are driven by T cell survival and homeostatic proliferation

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8 July 2018

Human immunodeficiency virus type 1 population genetics and adaptation in newly infected individuals.

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Frequent polymorphism at drug resistance sites in HIV-1 protease and reverse transcriptase

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8 July 2018

Predominant mode of human immunodeficiency virus transfer between T cells is mediated by sustained Env-dependent neutralization-resistant virological synapses

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8 July 2018

Comparative study of methods for detecting sequence compartmentalization in human immunodeficiency virus type 1.

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8 July 2018

Differential susceptibility of naïve, central memory and effector memory T cells to dendritic cell-mediated HIV-1 transmission

1 reference

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8 July 2018

Three-dimensional atlas of lymph node topography based on the visible human data set.

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8 July 2018

Evolution of human immunodeficiency virus under selection and weak recombination

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8 July 2018

Multiple, linked human immunodeficiency virus type 1 drug resistance mutations in treatment-experienced patients are missed by standard genotype analysis

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8 July 2018

HyPhy: hypothesis testing using phylogenies

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8 July 2018

Primary HIV-1 infection is associated with preferential depletion of CD4+ T lymphocytes from effector sites in the gastrointestinal tract

1 reference

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8 July 2018

T-cell subsets that harbor human immunodeficiency virus (HIV) in vivo: implications for HIV pathogenesis

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8 July 2018

Retroviral recombination: review of genetic analyses

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8 July 2018

Identification of shared populations of human immunodeficiency virus type 1 infecting microglia and tissue macrophages outside the central nervous system.

1 reference

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8 July 2018

Highly restricted spread of HIV-1 and multiply infected cells within splenic germinal centers

1 reference

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8 July 2018

B cells of HIV-1-infected patients bind virions through CD21-complement interactions and transmit infectious virus to activated T cells

1 reference

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8 July 2018

Reservoirs for HIV-1: mechanisms for viral persistence in the presence of antiviral immune responses and antiretroviral therapy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3688524

8 July 2018

Both memory and CD45RA+/CD62L+ naive CD4(+) T cells are infected in human immunodeficiency virus type 1-infected individuals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3688524

8 July 2018

Germinal centre CD4+ T cells are an important site of HIV replication in vivo.

1 reference

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8 July 2018

The HIV coreceptors CXCR4 and CCR5 are differentially expressed and regulated on human T lymphocytes

1 reference

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8 July 2018

CD4+ memory T cells are the predominant population of HIV-1-infected lymphocytes in neonates and children.

1 reference

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8 July 2018

HIV infection is active and progressive in lymphoid tissue during the clinically latent stage of disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3688524

8 July 2018

Turnover of naive- and memory-phenotype T cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3688524

8 July 2018

HIV population dynamics in vivo: implications for genetic variation, pathogenesis, and therapy

1 reference

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Lower in vivo mutation rate of human immunodeficiency virus type 1 than that predicted from the fidelity of purified reverse transcriptase

1 reference

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Loss of CD4 T lymphocytes in patients infected with human immunodeficiency virus type 1 is more pronounced in the duodenal mucosa than in the peripheral blood. Berlin Diarrhea/Wasting Syndrome Study Group

1 reference

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Preferential infection of CD4+ memory T cells by human immunodeficiency virus type 1: evidence for a role in the selective T-cell functional defects observed in infected individuals

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Quiescent T lymphocytes as an inducible virus reservoir in HIV-1 infection

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Distribution of lymphocyte subsets and natural killer cells in the human body

1 reference

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8 July 2018

Recombination: Multiply infected spleen cells in HIV patients

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1003432

21 January 2018

Residual human immunodeficiency virus (HIV) Type 1 RNA and DNA in lymph nodes and HIV RNA in genital secretions and in cerebrospinal fluid after suppression of viremia for 2 years

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https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1003432

21 January 2018

Dynamics of total, linear nonintegrated, and integrated HIV-1 DNA in vivo and in vitro

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1003432

21 January 2018

Both CD31(+) and CD31⁻ naive CD4(+) T cells are persistent HIV type 1-infected reservoirs in individuals receiving antiretroviral therapy

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https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1003432

21 January 2018

GARD: a genetic algorithm for recombination detection

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https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1003432

21 January 2018

In situ detection of PCR-amplified HIV-1 nucleic acids in lymph nodes and peripheral blood in patients with asymptomatic HIV-1 infection and advanced-stage AIDS

1 reference

https://pubmed.ncbi.nlm.nih.gov/23818847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparison of viral burden and phenotype of HIV-1 isolates from lymph nodes and blood

1 reference

https://pubmed.ncbi.nlm.nih.gov/23818847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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10.1371/JOURNAL.PPAT.1003432

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

ResearchGate publication ID

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