MCMC estimation of Markov models for ion channels. (Q34800939)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21504728%20AND%20SRC:MED&resulttype=core&format=json

29 January 2020

title

MCMC estimation of Markov models for ion channels (English)

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29 January 2020

1

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29 January 2020

Colin Fox

4

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29 January 2020

James Sneyd

7

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29 January 2020

author name string

Larry E Wagner

2

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29 January 2020

David Yule

3

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29 January 2020

David Bryant

5

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29 January 2020

Edmund J Crampin

6

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29 January 2020

language of work or name

English

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publication date

1 April 2011

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29 January 2020

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29 January 2020

volume

100

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29 January 2020

issue

8

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29 January 2020

page(s)

1919-1929

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Inositol trisphosphate receptor and ion channel models based on single-channel data

29 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3077709

Allosteric control of gating mechanisms revisited: the large conductance Ca2+-activated K+ channel.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3077709

Markov chain Monte Carlo fitting of single-channel data from inositol trisphosphate receptors

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3077709

Regulation of single inositol 1,4,5-trisphosphate receptor channel activity by protein kinase A phosphorylation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3077709

Analysis of single ion channel data incorporating time-interval omission and sampling

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3077709

Using independent open-to-closed transitions to simplify aggregated Markov models of ion channel gating kinetics

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3077709

Calcium regulation of single ryanodine receptor channel gating analyzed using HMM/MCMC statistical methods.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3077709

Restoration of single-channel currents using the segmental k-means method based on hidden Markov modeling

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3077709

Applying hidden Markov models to the analysis of single ion channel activity

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3077709

Bayesian restoration of ion channel records using hidden Markov models

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3077709

The automated analysis of data from single ionic channels

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3077709

On the stochastic properties of single ion channels

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3077709

Statistical inference from single channel records: two-state Markov model with limited time resolution

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3077709

Stochastic modelling of a single ion channel: an alternating renewal approach with application to limited time resolution.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3077709

Correcting single channel data for missed events

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3077709

A general solution to the time interval omission problem applied to single channel analysis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3077709

Estimating kinetic parameters for single channels with simulation. A general method that resolves the missed event problem and accounts for noise

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3077709

Yet another approach to the dwell-time omission problem of single-channel analysis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3077709

Bayesian restoration of single-channel patch clamp recordings

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3077709

Maximum likelihood estimation and identification directly from single-channel recordings

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3077709

Single-channel currents recorded from membrane of denervated frog muscle fibres

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3077709

MCMC for hidden Markov models incorporating aggregation of states and filtering.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3077709

Maximum likelihood estimation of aggregated Markov processes.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3077709

Ion-channel gating mechanisms: model identification and parameter estimation from single channel recordings.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3077709

Asymptotic distributions of apparent open times and shut times in a single channel record allowing for the omission of brief events

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3077709

10.1016/J.BPJ.2011.02.059

26 October 2018

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21504728%20AND%20SRC:MED&resulttype=core&format=json

29 January 2020

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29 January 2020

PubMed publication ID

21504728

1 reference