Transcript elongation on a nucleoprotein template (Q34816702)

4 August 2017

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title

Transcript elongation on a nucleoprotein template (English)

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4 August 2017

Grant A Hartzog

1

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4 August 2017

Jennifer L Speer

series ordinal

2

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4 August 2017

Derek L Lindstrom

series ordinal

3

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4 August 2017

language of work or name

English

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publication date

1 September 2002

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Biochimica et Biophysica Acta

4 August 2017

published in

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4 August 2017

volume

1577

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4 August 2017

issue

2

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4 August 2017

page(s)

276-286

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Twenty-five years of the nucleosome, fundamental particle of the eukaryote chromosome

4 August 2017

cites work

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Histone acetyltransferases

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The language of covalent histone modifications

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Mapping chromosomal proteins in vivo by formaldehyde-crosslinked-chromatin immunoprecipitation

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7 January 2021

Crystal structure of the nucleosome core particle at 2.8 A resolution

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7 January 2021

Effects of core histone tail domains on the equilibrium constants for dynamic DNA site accessibility in nucleosomes

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7 January 2021

The core histone N termini function independently of linker histones during chromatin condensation.

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7 January 2021

Linker histones stabilize the intrinsic salt-dependent folding of nucleosomal arrays: mechanistic ramifications for higher-order chromatin folding

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7 January 2021

The biochemical and phenotypic characterization of Hho1p, the putative linker histone H1 of Saccharomyces cerevisiae

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7 January 2021

Linker histones are not essential and affect chromatin condensation in vivo

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7 January 2021

Transcribed chromatin

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7 January 2021

Reversible and irreversible changes in nucleosome structure along the c-fos and c-myc oncogenes following inhibition of transcription

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7 January 2021

Affinity chromatographic purification of nucleosomes containing transcriptionally active DNA sequences

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7 January 2021

Visualization and analysis of unfolded nucleosomes associated with transcribing chromatin

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7 January 2021

The HMG-14/-17 chromosomal protein family: architectural elements that enhance transcription from chromatin templates

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7 January 2021

Stimulation of RNA polymerase II elongation by chromosomal protein HMG-14

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7 January 2021

Large-scale chromatin decondensation and recondensation regulated by transcription from a natural promoter

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7 January 2021

Transcriptional state of the mouse mammary tumor virus promoter can affect topological domain size in vivo

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https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

The glucocorticoid receptor: rapid exchange with regulatory sites in living cells

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https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

P-TEFb, a cyclin-dependent kinase controlling elongation by RNA polymerase II

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7 January 2021

Phosphorylation of the C-terminal domain of RNA polymerase II.

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7 January 2021

Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription

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7 January 2021

Alteration of nucleosome structure as a mechanism of transcriptional regulation

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7 January 2021

Histone acetylation: chromatin in action

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7 January 2021

Disruption of higher-order folding by core histone acetylation dramatically enhances transcription of nucleosomal arrays by RNA polymerase III

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Histone acetylation and transcriptional regulatory mechanisms

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https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Histone acetylation is required to maintain the unfolded nucleosome structure associated with transcribing DNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Effects of histone acetylation on the equilibrium accessibility of nucleosomal DNA target sites

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Effects of histone tail domains on the rate of transcriptional elongation through a nucleosome

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Histone acetylation: influence on transcription, nucleosome mobility and positioning, and linker histone-dependent transcriptional repression

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https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Role of inorganic polyphosphate in promoting ribosomal protein degradation by the Lon protease in E. coli

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https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Linking global histone acetylation to the transcription enhancement of X-chromosomal genes in Drosophila males

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https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Looping, linking, and chromatin activity: new insights into beta-globin locus regulation

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https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Intergenic transcription and developmental remodeling of chromatin subdomains in the human beta-globin locus.

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Intergenic transcription and transinduction of the human beta-globin locus

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Chromatin modification by DNA tracking

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

RNA polymerase II elongation through chromatin

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

A human RNA polymerase II complex containing factors that modify chromatin structure

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Mechanisms for ATP-dependent chromatin remodelling

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https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Ordered recruitment of transcription and chromatin remodeling factors to a cell cycle- and developmentally regulated promoter.

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https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Cell cycle-regulated histone acetylation required for expression of the yeast HO gene

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Role of histone tails in nucleosome remodeling by Drosophila NURF.

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https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Critical role for the histone H4 N terminus in nucleosome remodeling by ISWI.

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https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

The Gcn5 bromodomain co-ordinates nucleosome remodelling

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Genetic interactions between TFIIS and the Swi-Snf chromatin-remodeling complex

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Activator-dependent regulation of transcriptional pausing on nucleosomal templates

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Protein traffic on the heat shock promoter: parking, stalling, and trucking along

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

The role of general initiation factors in transcription by RNA polymerase II

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

The RNA polymerase III transcription apparatus

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Control of elongation by RNA polymerase II

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Transcription on nucleosomal templates by RNA polymerase II in vitro: inhibition of elongation with enhancement of sequence-specific pausing.

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

The H3/H4 tetramer blocks transcript elongation by RNA polymerase II in vitro

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Influence of chromatin folding on transcription initiation and elongation by RNA polymerase III

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

A role for histones H2A/H2B in chromatin folding and transcriptional repression

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Nucleosomes inhibit the initiation of transcription but allow chain elongation with the displacement of histones

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

FACT, a factor that facilitates transcript elongation through nucleosomes

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

A nucleosome core is transferred out of the path of a transcribing polymerase

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

A histone octamer can step around a transcribing polymerase without leaving the template

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Facilitated transcription through the nucleosome at high ionic strength occurs via a histone octamer transfer mechanism

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Mechanism of transcription through the nucleosome by eukaryotic RNA polymerase

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

RNA polymerase-specific nucleosome disruption by transcription in vivo

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Elongator, a Multisubunit Component of a Novel RNA Polymerase II Holoenzyme for Transcriptional Elongation

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

RNA polymerase II elongator holoenzyme is composed of two discrete subcomplexes

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

A multiprotein complex that interacts with RNA polymerase II elongator

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Saccharomyces cerevisiae Elongator mutations confer resistance to the Kluyveromyces lactis zymocin

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

A novel histone acetyltransferase is an integral subunit of elongating RNA polymerase II holoenzyme

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Overlapping roles for the histone acetyltransferase activities of SAGA and elongator in vivo

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Basic mechanisms of transcript elongation and its regulation

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Involvement of yeast carboxy-terminal domain kinase I (CTDK-I) in transcription elongation in vivo

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Steady-state levels of histone acetylation in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

The SAGA of Spt proteins and transcriptional analysis in yeast: past, present, and future

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Mutations in SPT16/CDC68 suppress cis- and trans-acting mutations that affect promoter function in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Evidence that Spt6p controls chromatin structure by a direct interaction with histones

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Evidence that SNF2/SWI2 and SNF5 activate transcription in yeast by altering chromatin structure

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Functional interaction between pleiotropic transactivator pUL69 of human cytomegalovirus and the human homolog of yeast chromatin regulatory protein SPT6

1 reference

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7 January 2021

Identification and analysis of a functional human homolog of the SPT4 gene of Saccharomyces cerevisiae

1 reference

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7 January 2021

The ISWI chromatin-remodeling protein is required for gene expression and the maintenance of higher order chromatin structure in vivo

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Molecular and genetic characterization of SPT4, a gene important for transcription initiation in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

CDC68, a yeast gene that affects regulation of cell proliferation and transcription, encodes a protein with a highly acidic carboxyl terminus

1 reference

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7 January 2021

Mutations in the zebrafish unmask shared regulatory pathways controlling the development of catecholaminergic neurons.

1 reference

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7 January 2021

emb-5, a gene required for the correct timing of gut precursor cell division during gastrulation in Caenorhabditis elegans, encodes a protein similar to the yeast nuclear protein SPT6.

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

The chromatin-specific transcription elongation factor FACT comprises human SPT16 and SSRP1 proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

The Saccharomyces cerevisiae DNA polymerase alpha catalytic subunit interacts with Cdc68/Spt16 and with Pob3, a protein similar to an HMG1-like protein

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Characterization of the CP complex, an abundant dimer of Cdc68 and Pob3 proteins that regulates yeast transcriptional activation and chromatin repression

1 reference

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7 January 2021

A bipartite yeast SSRP1 analog comprised of Pob3 and Nhp6 proteins modulates transcription

1 reference

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7 January 2021

Spt16-Pob3 and the HMG protein Nhp6 combine to form the nucleosome-binding factor SPN.

1 reference

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7 January 2021

NHP6A and NHP6B, which encode HMG1-like proteins, are candidates for downstream components of the yeast SLT2 mitogen-activated protein kinase pathway

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

In vivo studies on the dynamics of histone-DNA interaction: evidence for nucleosome dissolution during replication and transcription and a low level of dissolution independent of both

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Eukaryotic RNA polymerase II binds to nucleosome cores from transcribed genes

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Evidence that Spt4, Spt5, and Spt6 control transcription elongation by RNA polymerase II in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

DSIF, a novel transcription elongation factor that regulates RNA polymerase II processivity, is composed of human Spt4 and Spt5 homologs

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Evidence that P-TEFb alleviates the negative effect of DSIF on RNA polymerase II-dependent transcription in vitro

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

NELF, a multisubunit complex containing RD, cooperates with DSIF to repress RNA polymerase II elongation

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Stimulation of RNA polymerase II elongation by hepatitis delta antigen

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

The molecular biology of hepatitis delta virus

1 reference

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7 January 2021

Activation of heterologous gene expression by the large isoform of hepatitis delta antigen

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Inhibition of Cellular RNA polymerase II transcription by delta antigen of hepatitis delta virus

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Spt5 and spt6 are associated with active transcription and have characteristics of general elongation factors in D. melanogaster

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

High-resolution localization of Drosophila Spt5 and Spt6 at heat shock genes in vivo: roles in promoter proximal pausing and transcription elongation

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

FACT relieves DSIF/NELF-mediated inhibition of transcriptional elongation and reveals functional differences between P-TEFb and TFIIH

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Faithful chromosome transmission requires Spt4p, a putative regulator of chromatin structure in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Spt4 modulates Rad26 requirement in transcription-coupled nucleotide excision repair

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Differential intrachromosomal hyper-recombination phenotype of spt4 and spt6 mutants of S. cerevisiae.

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Positive transcription elongation factor B phosphorylates hSPT5 and RNA polymerase II carboxyl-terminal domain independently of cyclin-dependent kinase-activating kinase.

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Domains in the SPT5 protein that modulate its transcriptional regulatory properties

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

DSIF and NELF interact with RNA polymerase II elongation complex and HIV-1 Tat stimulates P-TEFb-mediated phosphorylation of RNA polymerase II and DSIF during transcription elongation

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Control of formation of two distinct classes of RNA polymerase II elongation complexes.

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Hypertrophic Agonists Stimulate the Activities of the Protein Kinases c-Raf and A-Raf in Cultured Ventricular Myocytes

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

HIV-1 Tat: coping with negative elongation factors

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Blocking of Tat-dependent HIV-1 RNA modification by an inhibitor of RNA polymerase II processivity

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Transcription elongation factor P-TEFb is required for HIV-1 tat transactivation in vitro

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Role of the human homolog of the yeast transcription factor SPT5 in HIV-1 Tat-activation

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Tat-SF1 protein associates with RAP30 and human SPT5 proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

A novel RNA polymerase II-containing complex potentiates Tat-enhanced HIV-1 transcription

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Phosphorylation of the RNA polymerase II carboxy-terminal domain by the Bur1 cyclin-dependent kinase

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Modulation of RNA polymerase II elongation efficiency by C-terminal heptapeptide repeat domain kinase I.

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

A protein kinase that phosphorylates the C-terminal repeat domain of the largest subunit of RNA polymerase II

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Genome-wide location and function of DNA binding proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

Genomic binding sites of the yeast cell-cycle transcription factors SBF and MBF

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900458-X

7 January 2021

10.1016/S0167-4781(02)00458-X

Identifiers

DOI

1 reference

4 August 2017

1 reference