Genome-wide evidence for an essential role of the human Staf/ZNF143 transcription factor in bidirectional transcription (Q34865066)

5 August 2017

Genome-wide evidence for an essential role of the human Staf/ZNF143 transcription factor in bidirectional transcription (English)

1 reference

5 August 2017

6

Odile Lecompte

1 reference

5 August 2017

Yannick-Noël Anno

1

1 reference

5 August 2017

Evelyne Myslinski

2

1 reference

5 August 2017

Richard Patryk Ngondo-Mbongo

3

1 reference

5 August 2017

Alain Krol

4

1 reference

5 August 2017

Olivier Poch

5

1 reference

5 August 2017

Philippe Carbon

7

1 reference

5 August 2017

language of work or name

English

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publication date

21 December 2010

1 reference

5 August 2017

Nucleic Acids Research

1 reference

5 August 2017

39

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5 August 2017

8

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5 August 2017

3116-3127

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Creative Commons Attribution-NonCommercial 2.5 Generic

5 August 2017

start time

7 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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The scaRNA2 is produced by an independent transcription unit and its processing is directed by the encoding region

8 July 2018

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Widespread bidirectional promoters are the major source of cryptic transcripts in yeast

8 July 2018

1 reference

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Bidirectional promoters generate pervasive transcription in yeast

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3082894

Divergent transcription from active promoters

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3082894

RNA exosome depletion reveals transcription upstream of active human promoters

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3082894

Diversity of core promoter elements comprising human bidirectional promoters

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3082894

Transcription regulation through promoter-proximal pausing of RNA polymerase II.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3082894

8 July 2018

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Transcription factor hStaf/ZNF143 is required for expression of the human TFAM gene

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3082894

Transcription factor binding and modified histones in human bidirectional promoters

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3082894

Mammalian RNA polymerase II core promoters: insights from genome-wide studies

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3082894

Transcription of the human cell cycle regulated BUB1B gene requires hStaf/ZNF143

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3082894

The bidirectional promoter of two genes for the mitochondrial translational apparatus in mouse is regulated by an array of CCAAT boxes interacting with the transcription factor NF-Y

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3082894

A genome scale location analysis of human Staf/ZNF143-binding sites suggests a widespread role for human Staf/ZNF143 in mammalian promoters

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3082894

Complex Loci in human and mouse genomes

8 July 2018

1 reference

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Comparative genomics of bidirectional gene pairs and its implications for the evolution of a transcriptional regulation system

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3082894

MatInspector and beyond: promoter analysis based on transcription factor binding sites

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3082894

Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3082894

An abundance of bidirectional promoters in the human genome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3082894

Multiple, dispersed human U6 small nuclear RNA genes with varied transcriptional efficiencies

8 July 2018

1 reference

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An unusually compact external promoter for RNA polymerase III transcription of the human H1RNA gene

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3082894

Small nuclear RNA genes: a model system to study fundamental mechanisms of transcription

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3082894

A bidirectional promoter connects the poly(ADP-ribose) polymerase 2 (PARP-2) gene to the gene for RNase P RNA. structure and expression of the mouse PARP-2 gene

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3082894

Structural organization of Staf-DNA complexes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3082894

ZNF76 and ZNF143 are two human homologs of the transcriptional activator Staf

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3082894

Staf, a promiscuous activator for enhanced transcription by RNA polymerases II and III

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3082894

Staf, a novel zinc finger protein that activates the RNA polymerase III promoter of the selenocysteine tRNA gene

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3082894

A 7 bp mutation converts a human RNA polymerase II snRNA promoter into an RNA polymerase III promoter

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3082894

Bidirectional gene organization: a common architectural feature of the human genome.

8 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ1301

Maximization of selenocysteine tRNA and U6 small nuclear RNA transcriptional activation achieved by flexible utilization of a Staf zinc finger.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ1301

RNA polymerase plays both sides: vivid and bidirectional transcription around and upstream of active promoters.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3082894

RNA polymerase plays both sides: Vivid and bidirectional transcription around and upstream of active promoters

26 October 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ1301

Flexible zinc finger requirement for binding of the transcriptional activator staf to U6 small nuclear RNA and tRNA(Sec) promoters

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21177654

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKQ1301

1 reference

5 August 2017

1 reference

5 August 2017

1 reference