Transcriptional consequences of genomic structural aberrations in breast cancer (Q34867822)

5 August 2017

title

Transcriptional consequences of genomic structural aberrations in breast cancer (English)

1 reference

5 August 2017

21

Guillaume Bourque

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5 August 2017

13

Per Hall

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5 August 2017

12

Jonas Bergh

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5 August 2017

16

Atif Shahab

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5 August 2017

Koichiro Inaki

1

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5 August 2017

Axel M Hillmer

2

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5 August 2017

Leena Ukil

3

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5 August 2017

Fei Yao

4

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5 August 2017

Xing Yi Woo

5

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5 August 2017

Leah A Vardy

6

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5 August 2017

Kelson Folkvard Braaten Zawack

7

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5 August 2017

Charlie Wah Heng Lee

8

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5 August 2017

Pramila Nuwantha Ariyaratne

9

1 reference

5 August 2017

Yang Sun Chan

10

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5 August 2017

Kartiki Vasant Desai

11

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5 August 2017

Thomas Choudary Putti

14

1 reference

5 August 2017

Wai Loon Ong

15

1 reference

5 August 2017

Valere Cacheux-Rataboul

17

1 reference

5 August 2017

Radha Krishna Murthy Karuturi

18

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5 August 2017

Wing-Kin Sung

19

1 reference

5 August 2017

Xiaoan Ruan

20

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5 August 2017

Yijun Ruan

22

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5 August 2017

Edison T Liu

23

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5 August 2017

publication date

5 April 2011

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5 August 2017

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5 August 2017

volume

21

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5 August 2017

issue

5

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5 August 2017

page(s)

676-687

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Genome wide full-length transcript analysis using 5' and 3' paired-end-tag next generation sequencing (RNA-PET).

5 August 2017

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1 reference

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8 July 2018

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8 July 2018

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Complex landscapes of somatic rearrangement in human breast cancer genomes

8 July 2018

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8 July 2018

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Exon array profiling detects EML4-ALK fusion in breast, colorectal, and non-small cell lung cancers

8 July 2018

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RCP is a human breast cancer-promoting gene with Ras-activating function

8 July 2018

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Commonality but diversity in cancer gene fusions

8 July 2018

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A myelopoiesis-associated regulatory intergenic noncoding RNA transcript within the human HOXA cluster

8 July 2018

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A sequence-level map of chromosomal breakpoints in the MCF-7 breast cancer cell line yields insights into the evolution of a cancer genome

8 July 2018

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MicroRNA miR-21 overexpression in human breast cancer is associated with advanced clinical stage, lymph node metastasis and patient poor prognosis

8 July 2018

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A neoplastic gene fusion mimics trans-splicing of RNAs in normal human cells

8 July 2018

1 reference

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Mapping and sequencing of structural variation from eight human genomes

8 July 2018

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Evaluation of paired-end sequencing strategies for detection of genome rearrangements in cancer

8 July 2018

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A sequence-based survey of the complex structural organization of tumor genomes

8 July 2018

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Role of the TMPRSS2-ERG gene fusion in prostate cancer

8 July 2018

1 reference

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Characterization of TMPRSS2:ETV5 and SLC45A3:ETV5 gene fusions in prostate cancer.

8 July 2018

1 reference

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Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer

8 July 2018

1 reference

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ETV6-NTRK3 fusion oncogene initiates breast cancer from committed mammary progenitors via activation of AP1 complex

8 July 2018

1 reference

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Paired-end mapping reveals extensive structural variation in the human genome

8 July 2018

1 reference

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Distinct classes of chromosomal rearrangements create oncogenic ETS gene fusions in prostate cancer

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083084

Identification of the transforming EML4-ALK fusion gene in non-small-cell lung cancer

8 July 2018

1 reference

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Fusion transcripts and transcribed retrotransposed loci discovered through comprehensive transcriptome analysis using Paired-End diTags (PETs)

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083084

The impact of translocations and gene fusions on cancer causation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083084

Multiplex sequencing of paired-end ditags (MS-PET): a strategy for the ultra-high-throughput analysis of transcriptomes and genomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083084

Global alterations in mRNA polysomal recruitment in a cell model of colorectal cancer progression to metastasis

8 July 2018

1 reference

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Decoding the fine-scale structure of a breast cancer genome and transcriptome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083084

Recurrent fusion of TMPRSS2 and ETS transcription factor genes in prostate cancer.

8 July 2018

1 reference

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Translational deregulation in PDK-1-/- embryonic stem cells

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083084

MicroRNA gene expression deregulation in human breast cancer

8 July 2018

1 reference

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Translational profiling: the genome-wide measure of the nascent proteome.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083084

Finding fusion genes resulting from chromosome rearrangement by analyzing the expressed sequence databases

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083084

The 17q23 amplicon and breast cancer

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083084

Lymphoma- and leukemia-associated chromosomal translocations in healthy individuals

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083084

The protein kinase complement of the human genome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083084

Expression of the ETV6-NTRK3 gene fusion as a primary event in human secretory breast carcinoma

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083084

Cloning of BCAS3 (17q23) and BCAS4 (20q13) genes that undergo amplification, overexpression, and fusion in breast cancer

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083084

WD-repeat proteins: structure characteristics, biological function, and their involvement in human diseases

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083084

Detecting activation of ribosomal protein S6 kinase by complementary DNA and tissue microarray analysis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083084

The Dbl family of oncogenes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083084

Genetic reclassification of histologic grade delineates new clinical subtypes of breast cancer.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083084

Translational control of putative protooncogene Nm23-M2 by cytokines via phosphoinositide 3-kinase signaling

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083084

DEP domains: More than just membrane anchors

26 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21467264

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A hierarchical network controls protein translation during murine embryonic stem cell self-renewal and differentiation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21467264

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1101/GR.113225.110

1 reference

5 August 2017

1 reference

5 August 2017

1 reference