ASTD: The Alternative Splicing and Transcript Diversity database (Q34896547)

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title

ASTD: The Alternative Splicing and Transcript Diversity database (English)

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alternative mRNA splicing, via spliceosome

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based on heuristic

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author

Jean-Jack M Riethoven

5

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13

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23

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27

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Roderic Guigó i Serra

22

Roderic Guigó

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Mireya Plass

Mireya Plass

14

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Takeshi Ara

Takeshi Ara

18

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Stéphanie Boué

Stéphanie Boué

12

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Daniel Gautheret

Daniel Gautheret

29

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Jaak Vilo

Jaak Vilo

25

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Oliver Hofmann

Oliver Hofmann

9

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Winston Hide

Winston Hide

Magnus von Knebel Doeberitz

26

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24

Magnus von Knebel Doeberitz

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Gautier Koscielny

1

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Vincent Le Texier

2

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Chellappa Gopalakrishnan

3

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Vasudev Kumanduri

4

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Francesco Nardone

6

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Eleanor Stanley

7

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Christine Fallsehr

8

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Meelis Kull

10

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Eoghan Harrington

11

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Fabrice Lopez

15

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William Ritchie

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Virginie Moucadel

17

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Heike Pospisil

19

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Alexander Herrmann

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Jens G Reich

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Thangavel Alphonse Thanaraj

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publication date

24 December 2008

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volume

93

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issue

3

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page(s)

213-220

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Prominent use of distal 5' transcription start sites and discovery of a large number of additional exons in ENCODE regions

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cites work

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

The implications of alternative splicing in the ENCODE protein complement

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

PolyA_DB 2: mRNA polyadenylation sites in vertebrate genes

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

The connection between splicing and cancer.

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

The ASAP II database: analysis and comparative genomics of alternative splicing in 15 animal species

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

ECgene: an alternative splicing database update

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

HOLLYWOOD: a comparative relational database of alternative splicing

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

H-DBAS: alternative splicing database of completely sequenced and manually annotated full-length cDNAs based on H-Invitational

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

FAST DB: a website resource for the study of the expression regulation of human gene products

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

The transcriptional landscape of the mammalian genome

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

ASD: a bioinformatics resource on alternative splicing

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

AltTrans: transcript pattern variants annotated for both alternative splicing and alternative polyadenylation.

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

The disparate nature of "intergenic" polyadenylation sites

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

Autoregulation of polypyrimidine tract binding protein by alternative splicing leading to nonsense-mediated decay

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

A novel algorithm for computational identification of contaminated EST libraries

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

Strengths and weaknesses of EST-based prediction of tissue-specific alternative splicing

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

Discovery of novel splice forms and functional analysis of cancer-specific alternative splicing in human expressed sequences

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

Identification of alternatively spliced mRNA variants related to cancers by genome-wide ESTs alignment

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

Biased alternative polyadenylation in human tissues

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

Entropy measures quantify global splicing disorders in cancer

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

eVOC: a controlled vocabulary for unifying gene expression data

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

Beyond the 3' end: experimental validation of extended transcript isoforms

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

ASD: the Alternative Splicing Database.

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

Integrative annotation of 21,037 human genes validated by full-length cDNA clones

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

Identification of alternate polyadenylation sites and analysis of their tissue distribution using EST data.

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

DBTSS: DataBase of Human Transcription Start Sites, progress report 2006.

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

Conservation of human alternative splice events in mouse

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

dbSNP: a database of single nucleotide polymorphisms

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

New developments in the InterPro database

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

Nonsense-mediated mRNA decay: splicing, translation and mRNP dynamics

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

Inference of miRNA targets using evolutionary conservation and pathway analysis

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2008.11.003

10.1016/J.YGENO.2008.11.003

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Identifiers

DOI

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5 August 2017

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