Intestinal colonization: how key microbial players become established in this dynamic process: microbial metabolic activities and the interplay between the host and microbes (Q34941943)

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English	Intestinal colonization: how key microbial players become established in this dynamic process: microbial metabolic activities and the interplay between the host and microbes	scientific article

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scholarly article

1 reference

Europe PubMed Central

5 August 2017

Intestinal colonization: how key microbial players become established in this dynamic process: microbial metabolic activities and the interplay between the host and microbes (English)

1 reference

Europe PubMed Central

5 August 2017

Michiel Kleerebezem

5

object named as

Michiel Kleerebezem

0 references

Pieter Van den Abbeele

2

object named as

Pieter Van den Abbeele

0 references

Tom Van de Wiele

3

object named as

Tom Van de Wiele

0 references

author name string

Sahar El Aidy

1

1 reference

Europe PubMed Central

5 August 2017

Petra Louis

4

1 reference

Europe PubMed Central

5 August 2017

language of work or name

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publication date

15 August 2013

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Europe PubMed Central

5 August 2017

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Europe PubMed Central

5 August 2017

35

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Europe PubMed Central

5 August 2017

10

1 reference

Europe PubMed Central

5 August 2017

913-923

1 reference

Europe PubMed Central

5 August 2017

Temporal and spatial interplay of microbiota and intestinal mucosa drive establishment of immune homeostasis in conventionalized mice

1 reference

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Therapeutic modulation of microbiota-host metabolic interactions.

1 reference

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21 January 2018

Interactions between the microbiota and the immune system

1 reference

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21 January 2018

Microbiota, disease, and back to health: a metastable journey

1 reference

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21 January 2018

Ecological and evolutionary forces shaping microbial diversity in the human intestine

1 reference

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21 January 2018

A human gut microbial gene catalogue established by metagenomic sequencing

1 reference

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21 January 2018

Enterotypes of the human gut microbiome

1 reference

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21 January 2018

Host-bacterial mutualism in the human intestine

1 reference

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21 January 2018

Distinct signals from the microbiota promote different aspects of zebrafish gut differentiation

1 reference

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21 January 2018

Gnotobiotic zebrafish reveal evolutionarily conserved responses to the gut microbiota

1 reference

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21 January 2018

Interactions between commensal intestinal bacteria and the immune system

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Host-gut microbiota metabolic interactions

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Care for the community

1 reference

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21 January 2018

The gut flora as a forgotten organ

1 reference

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21 January 2018

Diversity, metabolism and microbial ecology of butyrate-producing bacteria from the human large intestine

1 reference

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21 January 2018

Microbial degradation of complex carbohydrates in the gut

1 reference

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21 January 2018

Complex glycan catabolism by the human gut microbiota: the Bacteroidetes Sus-like paradigm

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

The role of the gut microbiota in nutrition and health.

1 reference

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21 January 2018

Ruminococcus bromii is a keystone species for the degradation of resistant starch in the human colon.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Some are more equal than others: the role of "keystone" species in the degradation of recalcitrant substrates

1 reference

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21 January 2018

Linking phylogenetic identities of bacteria to starch fermentation in an in vitro model of the large intestine by RNA-based stable isotope probing.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Human nutrition, the gut microbiome and the immune system

1 reference

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21 January 2018

Development of the human infant intestinal microbiota

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Gut bacteria-host metabolic interplay during conventionalisation of the mouse germfree colon.

1 reference

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21 January 2018

Nursing our microbiota: molecular linkages between bifidobacteria and milk oligosaccharides

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

The human milk microbiome changes over lactation and is shaped by maternal weight and mode of delivery

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing

1 reference

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21 January 2018

Genomic and metabolic studies of the impact of probiotics on a model gut symbiont and host

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Establishment of the gut microbiota in Western infants.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Lactate-utilizing bacteria, isolated from human feces, that produce butyrate as a major fermentation product

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Cross-feeding between Bifidobacterium longum BB536 and acetate-converting, butyrate-producing colon bacteria during growth on oligofructose

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Eating for two: how metabolism establishes interspecies interactions in the gut

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Molecular modulation of intestinal epithelial barrier: contribution of microbiota

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Bacterial symbionts induce a FUT2-dependent fucosylated niche on colonic epithelium via ERK and JNK signaling.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

A model of host-microbial interactions in an open mammalian ecosystem

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Segmented filamentous bacteria are indigenous intestinal bacteria that activate intraepithelial lymphocytes and induce MHC class II molecules and fucosyl asialo GM1 glycolipids on the small intestinal epithelial cells in the ex-germ-free mouse.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Tissue-specific loss of fucosylated glycolipids in mice with targeted deletion of alpha(1,2)fucosyltransferase genes

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

A Genomic View of the Human-Bacteroides thetaiotaomicron Symbiosis

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Fucose sensing regulates bacterial intestinal colonization

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Multi-layered regulation of intestinal antimicrobial defense

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

We know you are in there: conversing with the indigenous gut microbiota

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Bacteria in the intestine, helpful residents or enemies from within?

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Lactate has the potential to promote hydrogen sulphide formation in the human colon.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Physiology and ecology of the sulphate-reducing bacteria

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Lactate is mainly fermented to butyrate by human intestinal microfloras but inter-individual variation is evident

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Two routes of metabolic cross-feeding between Bifidobacterium adolescentis and butyrate-producing anaerobes from the human gut.

1 reference

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21 January 2018

Impact of pH on lactate formation and utilization by human fecal microbial communities

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Molecular ecological analysis of the succession and diversity of sulfate-reducing bacteria in the mouse gastrointestinal tract

1 reference

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21 January 2018

A novel mucin sulphatase from human faeces: its identification, purification and characterization

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

A glycosulphatase that removes sulphate from mucus glycoprotein

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Faecal sulphatase in health and in inflammatory bowel disease

1 reference

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21 January 2018

Identification and quantitation of mucosal and faecal desulfovibrios using real time polymerase chain reaction

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

The gaseous mediator, hydrogen sulphide, inhibits in vitro motor patterns in the human, rat and mouse colon and jejunum

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

The contribution of sulphate reducing bacteria and 5-aminosalicylic acid to faecal sulphide in patients with ulcerative colitis

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Colonic sulfide in pathogenesis and treatment of ulcerative colitis

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Hydrogen sulphide: a bacterial toxin in ulcerative colitis?

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Hydrogen sulfide induces direct radical-associated DNA damage.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Non-pathogenic bacteria modulate colonic epithelial gene expression in germ-free mice

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

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Development of a semiquantitative degenerate real-time pcr-based assay for estimation of numbers of butyryl-coenzyme A (CoA) CoA transferase genes in complex bacterial samples

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Induction of colonic regulatory T cells by indigenous Clostridium species

1 reference

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21 January 2018

Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Butyrate-producing Clostridium cluster XIVa species specifically colonize mucins in an in vitro gut model

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

The control and consequences of bacterial fermentation in the human colon

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

pH and peptide supply can radically alter bacterial populations and short-chain fatty acid ratios within microbial communities from the human colon

1 reference

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21 January 2018

Probiotic and gut lactobacilli and bifidobacteria: molecular approaches to study diversity and activity

1 reference

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Expression of the cathelicidin LL-37 is modulated by short chain fatty acids in colonocytes: relevance of signalling pathways

1 reference

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21 January 2018

Regulation of inflammatory responses by gut microbiota and chemoattractant receptor GPR43

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Short chain fatty acids in human large intestine, portal, hepatic and venous blood

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Butyrate modulates oxidative stress in the colonic mucosa of healthy humans

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Molecular analysis of the effect of short-chain fatty acids on intestinal cell proliferation

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Gut flora metabolism of phosphatidylcholine promotes cardiovascular disease

1 reference

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21 January 2018

Towards the human intestinal microbiota phylogenetic core

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Diversity of human colonic butyrate-producing bacteria revealed by analysis of the butyryl-CoA:acetate CoA-transferase gene.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

The two mucus layers of colon are organized by the MUC2 mucin, whereas the outer layer is a legislator of host-microbial interactions

1 reference

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21 January 2018

Arabinoxylans and inulin differentially modulate the mucosal and luminal gut microbiota and mucin-degradation in humanized rats.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Spatial organization of intestinal microbiota in the mouse ascending colon

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Pyrosequencing-based analysis of the mucosal microbiota in healthy individuals reveals ubiquitous bacterial groups and micro-heterogeneity

1 reference

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Molecular characterization of mucosal adherent bacteria and associations with colorectal adenomas

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A pyrosequencing study in twins shows that gastrointestinal microbial profiles vary with inflammatory bowel disease phenotypes

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Selective colonization of insoluble substrates by human faecal bacteria.

1 reference

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21 January 2018

The species composition of the human intestinal microbiota differs between particle-associated and liquid phase communities

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Microbes inside--from diversity to function: the case of Akkermansia

1 reference

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21 January 2018

Role of oxygen gradients in shaping redox relationships between the human intestine and its microbiota

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

The gut anaerobe Faecalibacterium prausnitzii uses an extracellular electron shuttle to grow at oxic-anoxic interphases.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201300073

21 January 2018

Composition, variability, and temporal stability of the intestinal microbiota of the elderly

1 reference

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21 January 2018

Dysbiosis of bifidobacteria and Clostridium cluster XIVa in the cystic fibrosis fecal microbiota.

1 reference

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Isolation of flagellated bacteria implicated in Crohn's disease.

1 reference

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Faecalibacterium prausnitzii is an anti-inflammatory commensal bacterium identified by gut microbiota analysis of Crohn disease patients

1 reference

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21 January 2018

Reduced diversity of faecal microbiota in Crohn's disease revealed by a metagenomic approach

1 reference

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The effect of age and non-steroidal anti-inflammatory drugs on human intestinal microbiota composition

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Through ageing, and beyond: gut microbiota and inflammatory status in seniors and centenarians

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Intestinal integrity and Akkermansia muciniphila, a mucin-degrading member of the intestinal microbiota present in infants, adults, and the elderly.

1 reference

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Comparative study of the intestinal mucus barrier in normal and inflamed colon.

1 reference

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Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa

1 reference

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21 January 2018

Reduced dietary intake of carbohydrates by obese subjects results in decreased concentrations of butyrate and butyrate-producing bacteria in feces

1 reference

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21 January 2018

The role of pH in determining the species composition of the human colonic microbiota

1 reference

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21 January 2018

Shifting the balance: antibiotic effects on host-microbiota mutualism

1 reference

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21 January 2018

Iron depletion and repletion with ferrous sulfate or electrolytic iron modifies the composition and metabolic activity of the gut microbiota in rats

1 reference

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21 January 2018

Dominant and diet-responsive groups of bacteria within the human colonic microbiota

1 reference

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21 January 2018

Sulfide, the first inorganic substrate for human cells

1 reference

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21 January 2018

Human CD4+ T Cells Express TLR5 and Its Ligand Flagellin Enhances the Suppressive Capacity and Expression of FOXP3 in CD4+CD25+ T Regulatory Cells

1 reference

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21 January 2018

Microbiota-derived lactate accelerates colon epithelial cell turnover in starvation-refed mice

1 reference

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21 January 2018

Identifiers

10.1002/BIES.201300073

1 reference

Europe PubMed Central

5 August 2017

1 reference

Europe PubMed Central

5 August 2017

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