Postgwas: advanced GWAS interpretation in R. (Q34972221)

5 August 2017

Postgwas: advanced GWAS interpretation in R. (English)

1 reference

genome-wide association study

5 August 2017

0 references

author name string

Milan Hiersche

series ordinal

1

1 reference

5 August 2017

Frank Rühle

series ordinal

2

1 reference

5 August 2017

Monika Stoll

series ordinal

3

1 reference

5 August 2017

language of work or name

English

0 references

publication date

19 August 2013

1 reference

5 August 2017

1 reference

5 August 2017

8

1 reference

5 August 2017

8

1 reference

5 August 2017

e71775

1 reference

Creative Commons Attribution 4.0 International

5 August 2017

start time

19 August 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

A genome-wide association study identifies a gene network of ADAMTS genes in the predisposition to pediatric stroke

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

Presence of multiple independent effects in risk loci of common complex human diseases

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

Genome-wide patterns of genetic variation in worldwide Arabidopsis thaliana accessions from the RegMap panel

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

Statistical analysis of rare sequence variants: an overview of collapsing methods

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

Analysis of genome-wide association study data using the protein knowledge base

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

Identification of homogeneous genetic architecture of multiple genetically correlated traits by block clustering of genome-wide associations

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

Prioritizing candidate disease genes by network-based boosting of genome-wide association data.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

GATES: a rapid and powerful gene-based association test using extended Simes procedure

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

Risk alleles for systemic lupus erythematosus in a large case-control collection and associations with clinical subphenotypes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

Proteins encoded in genomic regions associated with immune-mediated disease physically interact and suggest underlying biology

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

A knowledge-based weighting framework to boost the power of genome-wide association studies

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

Analysing biological pathways in genome-wide association studies

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

dmGWAS: dense module searching for genome-wide association studies in protein-protein interaction networks

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

Hundreds of variants clustered in genomic loci and biological pathways affect human height

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

Estimation of effect size distribution from genome-wide association studies and implications for future discoveries

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

Finding the missing heritability of complex diseases

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

Validating, augmenting and refining genome-wide association signals

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

Common variants at 30 loci contribute to polygenic dyslipidemia

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

The 5q31 variants associated with psoriasis and Crohn's disease are distinct

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

Pathway-based approaches for analysis of genomewide association studies

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

PLINK: a tool set for whole-genome association and population-based linkage analyses

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

GOSim--an R-package for computation of information theoretic GO similarities between terms and gene products

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

GenABEL: an R library for genome-wide association analysis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

Statistical mechanics of community detection

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

Improved scoring of functional groups from gene expression data by decorrelating GO graph structure

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

Genome-wide association mapping in Arabidopsis identifies previously known flowering time and pathogen resistance genes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

A simple correction for multiple testing for single-nucleotide polymorphisms in linkage disequilibrium with each other

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

Genetic evidence for interaction of the 5q31 cytokine locus and the CARD15 gene in Crohn disease.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

Association of NOD2 leucine-rich repeat variants with susceptibility to Crohn's disease

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

Bayesian inference analyses of the polygenic architecture of rheumatoid arthritis

8 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0071775

Deconstruction of vulnerability to complex diseases: enhanced effect sizes and power of intermediate phenotypes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0071775

Modifiers and subtype-specific analyses in whole-genome association studies: a likelihood framework

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0071775

CandiSNPer: a web tool for the identification of candidate SNPs for causal variants

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0071775

Enriched pathways for major depressive disorder identified from a genome-wide association study.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3747239

Genome-wide association studies and systems biology: together at last

26 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23977141

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Variants in the 5q31 cytokine gene cluster are associated with psoriasis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23977141

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

IL4 in the 5q31 context: association studies of type 1 diabetes and rheumatoid arthritis in the Spanish population

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23977141

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0071775

1 reference

5 August 2017

0 references

1 reference

5 August 2017

1 reference